BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZD04RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1307 1209 0.0 >3x_Contig1307 Length = 7280 Score = 1209 bits (610), Expect = 0.0 Identities = 696/718 (96%), Gaps = 5/718 (0%) Strand = Plus / Minus Query: 42 gctttcgtctctt-atagcgatttgttgggctttagtggtatcggaacaagccatcaaat 100 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5043 gctttcgtctcttcatagcgatttgttgggctttagtggtatcggaacaagccatcaaat 4984 Query: 101 cagcattgactttatccatttctggtttaattttggaagtcctacctaaagtgtcagagt 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4983 cagcattgactttatccatttctggtttaattttggaagtcctacctaaagtgtcagagt 4924 Query: 161 atttcacgtacaaggggaatagcaagactcttgctaatactgtcgtgacacagatcgttg 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4923 atttcacgtacaaggggaatagcaagactcttgctaatactgtcgtgacacagatcgttg 4864 Query: 221 cccaccatggtagaccagcataaaagtgaatttgttccataacgttttgaatcaaatcag 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4863 cccaccatggtagaccagcataaaagtgaatttgttccataacgttttgaatcaaatcag 4804 Query: 281 gaggccacagccacgatttagccataccaatgctgcttaggtatccaatttggttggatg 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4803 gaggccacagccacgatttagccataccaatgctgcttaggtatccaatttggttggatg 4744 Query: 341 cgtcgccaattacttggcccacttgagaaacggtctctatcgtgttctcatcaaaagatg 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4743 cgtcgccaattacttggcccacttgagaaacggtctctatcgtgttctcatcaaaagatg 4684 Query: 401 gtaattgtgtttggatttctgaaactttggaagcagcgcctgctgcagcatcagacaccg 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4683 gtaattgtgtttggatttctgaaactttggaagcagcgcctgctgcagcatcagacaccg 4624 Query: 461 ctgaagaatcggatgagttgaaacgaatacttgaaaacccagtccatgcaaccctttgag 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4623 ctgaagaatcggatgagttgaaacgaatacttgaaaacccagtccatgcaaccctttgag 4564 Query: 521 tgccaaataactgaggttgaacaattgttcttggggatacttttccagcacgaaggattg 580 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4563 tgccaaataactgaggttgaacaattgttcttggggatactttcccagcacgaaggattg 4504 Query: 581 ccgatctgaacattgtgcgtgaaagagatacggccctagctttcttttatctactacttt 640 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4503 cggatctgaacattgtgcgtgaaagagatacggtcctagctttcttttatctactacttt 4444 Query: 641 gggctgtccaaggttctttagacgt-aagaaatttacc-actttgtagcag-gttttaca 697 | |||||||| | | |||||||||| ||||||| |||| |||| |||||| || | ||| Sbjct: 4443 gtgctgtccaggttcctttagacgtaaagaaatctaccaacttgttagcagtgtataaca 4384 Query: 698 cacaaagcaaacttgggataaatgtttttaactttttattgtaaaatcgagcttccat 755 ||||| ||||||||||||||| |||||| |||||| |||||| | ||||||||||||| Sbjct: 4383 cacaaggcaaacttgggataagtgttttgaactttctattgt-agatcgagcttccat 4327 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,081 Number of Sequences: 1807 Number of extensions: 13081 Number of successful extensions: 150 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)