BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZD08RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1533 1570 0.0 >3x_Contig1533 Length = 11082 Score = 1570 bits (792), Expect = 0.0 Identities = 852/866 (98%), Gaps = 5/866 (0%) Strand = Plus / Plus Query: 48 cagaagacaattgttccaattcattggaaacta-gtggacacacaatgggaattcatcga 106 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2076 cagaagacaattgttccaattcattggaaactaagtggacacacaatgggaattcatcga 2135 Query: 107 cagtggccttcttcttacccaaatcataaattctgatcttagagtctggaacagctctgt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2136 cagtggccttcttcttacccaaatcataaattctgatcttagagtctggaacagctctgt 2195 Query: 167 tgtatctagactttgggtaaggcttgttcttttggtatctgtaacatctattctggtctt 226 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2196 tgtatctagactttgggtaaggcttgttcttttggtatctgtaacatctag-ctggtctt 2254 Query: 227 ctagccattttgaattactttggacggtgataggtgatcggtgttcctgtaaataataaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2255 ctagccattttgaattactttggacggtgataggtgatcggtgttcctgtaaataataaa 2314 Query: 287 caaaattgaagcgaatgatcaaaccttatgttaaagatatcgataattatcattaaatta 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2315 caaaattgaagcgaatgatcaaaccttatgttaaagatatcgataattatcattaaatta 2374 Query: 347 tgttctctttttattacatttgaaaatctcgatgattaccaccaactattgcaggaagct 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2375 tgttctctttttattacatttgaaaatctcgatgattaccaccaactattgcaggaagct 2434 Query: 407 tttgcatttgtcagaaacttgaaaaagattggaaagtcgtagcgaagtcacacggtaaga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2435 tttgcatttgtcagaaacttgaaaaagattggaaagtcgtagcgaagtcacacggtaaga 2494 Query: 467 aactactgtgaaaacaaatcaaagaaaatagttactaatcacgtgctctatttcctattg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2495 aactactgtgaaaacaaatcaaagaaaatagttactaatcacgtgctctatttcctattg 2554 Query: 527 tggttgtttttgtatcataaaaatatgttgaatgccaatatgtaatagtgtctgggtgtt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2555 tggttgtttttgtatcataaaaatatgttgaatgccaatatgtaatagtgtctgggtgtt 2614 Query: 587 ggggatagcagtcccagatgcgttgttatgcacgtgatgctgattgaaatttcatttctt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2615 ggggatagcagtcccagatgcgttgttatgcacgtgatgctgattgaaatttcatttctt 2674 Query: 647 ntccaagtcgatgagatgagatgagatgagacgagacatgatattgcagaaaattttatg 706 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2675 ttccaagtcgatgagatgagatgagatgagacgagacatgatattgcagaaaattttatg 2734 Query: 707 tactcggtgtttctacgataaagccaagtgcgaagaaagaagtacaaacacacatcattg 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2735 tactcggtgtttctacgataaagccaagtgcgaagaaagaagtacaaacacacatcattg 2794 Query: 767 aatctctttctctatgagacttagatactcattggnttttgtttgatagtttaagttaat 826 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2795 aatctctttctctatgagacttagatactcattgg-ttttgtttgatagtttaagttaat 2853 Query: 827 ctgtggtaccagcctgtcanaaatttaggag-aggttag-aaggaaaatgggaagatatc 884 ||||||||||||||||||| |||| |||||| |||| || ||||||||||||||||||| Sbjct: 2854 ctgtggtaccagcctgtcagaaatataggagaaggtaagaaaggaaaatgggaagatatt 2913 Query: 885 ttgttaaacgttccaggacgaagaga 910 ||||||||||| || |||||||||| Sbjct: 2914 ctgttaaacgttacaagacgaagaga 2939 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8810 Number of Sequences: 1807 Number of extensions: 8810 Number of successful extensions: 516 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)