BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZE02FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1728 1449 0.0 >3x_Contig1728 Length = 20685 Score = 1449 bits (731), Expect = 0.0 Identities = 793/807 (98%), Gaps = 5/807 (0%) Strand = Plus / Plus Query: 88 tggatgcttcagattaaggaacatttaaatagtaaataggtacttttcagggtgtttatt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10525 tggatgcttcagattaaggaacatttaaatagtaaataggtacttttcagggtgtttatt 10584 Query: 148 ataaatgcatatctataaatgctggatcgagtacgaatgaacgataacagctgttgcagt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10585 ataaatgcatatctataaatgctggatcgagtacgaatgaacgataacagctgttgcagt 10644 Query: 208 ttggatattcatgttttttattaccccagattgtttgatttctaagcataaatccaactc 267 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10645 ttggatattcatggatcttattaccccagattgtttgatttctaagcataaatccaactc 10704 Query: 268 ctttaacaaatgccctggaataccatgagcttctgttcctagtaaaatgacagattttga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10705 ctttaacaaatgccctggaataccatgagcttctgttcctagtaaaatgacagattttga 10764 Query: 328 tggaaatttaaattcagaattcagttgaatggaagaatcagtctgctccaatccaattaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10765 tggaaatttaaattcagaattcagttgaatggaagaatcagtctgctccaatccaattaa 10824 Query: 388 cgtatatccttccaacttctttgcattcatgtaagatattataccatcgacaggaacttc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10825 cgtatatccttccaacttctttgcattcatgtaagatattataccatcgacaggaacttc 10884 Query: 448 ttcaataggcatccagcggtccgctgtaaccgcaacatttttgaattgaggatgctgttt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10885 ttcaataggcatccagcggtccgctgtaaccgcaacatttttgaattgaggatgctgttt 10944 Query: 508 gactctaatatcatgaattgtcatagtaccgacacccaacacgtcacagagtctacaaat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10945 gactctaatatcatgaattgtcatagtaccgacacccaacacgtcacagagtctacaaat 11004 Query: 568 acctccgagattgggtgctttatccactaatgaagctacgacaattaattcagatcgtgc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11005 acctccgagattgggtgctttatccactaatgaagctacgacaattaattcagatcgtgc 11064 Query: 628 aacagactcaatggatttttgattatcgaaatccaagacagcttcccaagcaccactctt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11065 aacagactcaatggatttttgattatcgaaatccaagacagcttcccaagcaccactctt 11124 Query: 688 cgtttgtaggggcgagttttttgctaactcagttgaatttactagattactacttctttt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11125 cgtttgtaggggcgagttttttgctaactcagttgaatttactagattactacttctttt 11184 Query: 748 ggtcaaccatagttcactcttttccgatcctatttcaaa-tcaccgtcatcgatgttaat 806 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 11185 ggtcaaccatagttcactctcttccgatcctatttcaaattcaccgtcatcgatgttaat 11244 Query: 807 ggcttttgaatatcttactatttatattatggaactttattgat-catgattttcattaa 865 ||| |||||||||||||||||||||| |||||||||||| |||| ||| ||||||| ||| Sbjct: 11245 ggc-tttgaatatcttactatttata-tatggaacttta-tgatccataattttcaataa 11301 Query: 866 taccccgccaaaattacttgttaactt 892 ||| |||||||| ||||||||||||| Sbjct: 11302 tacgccgccaaatatacttgttaactt 11328 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6813 Number of Sequences: 1807 Number of extensions: 6813 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)