BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZE03RM1.SCF screened BAC_end (887 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1474 1340 0.0 >3x_Contig1474 Length = 10584 Score = 1340 bits (676), Expect = 0.0 Identities = 763/781 (97%), Gaps = 10/781 (1%) Strand = Plus / Minus Query: 43 gcttttatccagttgataccattctccaaatatcattttgtagatttttcttgttctcac 102 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 8049 gcttttatccagttgatac-attctccaaatatcattttgtagatttttcttgttctcac 7991 Query: 103 tgtcgacagcgttgatctctttatccgttgaagccttgttaaacaatggacatgagaaaa 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7990 tgtcgacagcgttgatctctttatccgttgaagccttgttaaacaatggacatgagaaaa 7931 Query: 163 acccggaaaatctatccaatgccggatataaattctcatgatttaaatgaaaattgttat 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 7930 acccggaaaatctatccaatgccggatataaattctcatgatttaaatgaaaatagtaat 7871 Query: 223 tggtgttttgtgatccggtgtaagcattcgaggagccgccatgcttggacaaaaacgaag 282 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7870 tggtgttttgtgatccggtgtaagcattcgaggagccgccatggttggacaaaaacgaag 7811 Query: 283 aatagtcgttttcatcaggatatttttcgttccccatgaacaaaagatgttcgcaaaaat 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7810 aatagtcgttttcatcaggatatttttcgttccccatgaacaaaagatgttcgcaaaaat 7751 Query: 343 gcgccaaccctggcaaatgttccggatcctggaaagatccgatattgacatccaacgcag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7750 gcgccaaccctggcaaatgttccggatcctggaaagatccgatattgacatccaacgcag 7691 Query: 403 cggcagctttatctgcttcagcatctgaaatcaataaagcttttaaattattaggcaact 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7690 cggcagctttatctgcttcagcatctgaaatcaataaagcttttaaattattaggcaact 7631 Query: 463 ggatgtacctgtacttccgatcgtctaaatctggctttaaaaactcggaatctgtcccta 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7630 ggatgtacctgtacttccgatcgtctaaatctggctttaaaaactcggaatctgtcccta 7571 Query: 523 aggtcctgtatttattagacattttcgtattataatgcaaaaaacggtatctcgatgtta 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7570 aggtcctgtatttattagacattttcgtattataatgcaaaaaacggtatctcgatgtta 7511 Query: 583 gcaaacaactgacagatatctttgaagccaatagggacgtcggttgagataatattccct 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7510 gcaaacaactgacagatatctttgaagccaatagggacgtcggttgagataatattccct 7451 Query: 643 tgaccgctgctagcatcagtttctagaactagtattattccaaatgaataaccgctggna 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7450 gaaccgctgctagcatcagtttctagaactagtattattccaaatgaataaccgctggaa 7391 Query: 703 atcccctt-aaactgtatgtgtgttcaaaagtgttc-aaaanaaaaagcc-ttgatttaa 759 |||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct: 7390 atccccttaaaactgtatgtgtgttcaaaagtgttcaaaaaaaaaaagcctttgatttaa 7331 Query: 760 t-cgaag-aaaaatatc-aaaccttt-aaatctgtatgtt--ccaaatctggatattctt 813 | ||||| ||||||||| |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 7330 tccgaagaaaaaatatcaaaacctttaaaatctgtatgtttccaaaatctggatattctt 7271 Query: 814 t 814 | Sbjct: 7270 t 7270 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6975 Number of Sequences: 1807 Number of extensions: 6975 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 887 length of database: 10,358,551 effective HSP length: 16 effective length of query: 871 effective length of database: 10,329,639 effective search space: 8997115569 effective search space used: 8997115569 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)