BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZE09RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1429 1560 0.0 >3x_Contig1429 Length = 8041 Score = 1560 bits (787), Expect = 0.0 Identities = 848/861 (98%), Gaps = 6/861 (0%) Strand = Plus / Plus Query: 49 agaatcagaaagatgatgatgatgacgaatatat-agaaaagttcgtacagctgtagaac 107 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3759 agaatcagaaagatgatgatgatgacgaatatattagaaaagttcgtacagctgtagaac 3818 Query: 108 a-ttcgaaaaggcaggcttcttcgaggatttagacgatactaaaaagggttcaaaaacaa 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3819 aattcgaaaaggcaggcttcttcgaggatttagacgatactaaaaagggttcaaaaacaa 3878 Query: 167 aagccatggtatataagctagcagacgaggtgatagcccgacataaagacaaactcttac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3879 aagccatggtatataagctagcagacgaggtgatagcccgacataaagacaaactcttac 3938 Query: 227 gcataagagacccaaattatgataagtgg-tctgaaccattaaaaacccccatgatagat 285 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3939 gcataagagacccaaattatgataagtgggtctgaaccattaaaaacccccatgatagat 3998 Query: 286 aaatatcatgaaatcaaagaagaatggagacgtgaggaaacgaaccacggttccagtagt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3999 aaatatcatgaaatcaaagaagaatggagacgtgaggaaacgaaccacggttccagtagt 4058 Query: 346 ttaaacaacagttcaatgactacacagaatgttacatttgcatggagttcaaatgctcat 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4059 ttaaacaacagttcaatgactacacagaatgttacatttgcatggagttcaaatgctcat 4118 Query: 406 cgaccggagctgaccgcaccaaagaagcctttggaaccgcattccaataagaaatcaaca 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4119 cgaccggagctgaccgcaccaaagaagcctttggaaccgcattccaataagaaatcaaca 4178 Query: 466 aatgaaatactacggagtaaagcaatgaaaagcgctcatgaattaagaagtaagcaaatt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4179 aatgaaatactacggagtaaagcaatgaaaagcgctcatgaattaagaagtaagcaaatt 4238 Query: 526 ctgctcaataaactgcgggataaaaatgatagaaacaatctgccttcacaggatggtgat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4239 ctgctcaataaactgcgggataaaaatgatagaaacaatctgccttcacaggatggtgat 4298 Query: 586 gatgtcaagccgaaatttaaaatggatcccttggaaccatttgtcgccaaagctttaccg 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4299 gatgtcaagccgaaatttaaaatggatcccttggaaccatttgtcgccaaagctttaccg 4358 Query: 646 agagagaagaagaagcgaccaaaggagaaaaggaagagcanattttggttttggggatcc 705 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4359 agagagaagaagaagcgaccaaaggagaaaaggaagagcaaattttggttttggggatcc 4418 Query: 706 cttacccatcatactgacgaaggaaaccacagagaccaagctaggtcgncagagcttgaa 765 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 4419 cttacccatcatactgacgaaggaaaccacagagacaaagctaggtcgccagagcttgaa 4478 Query: 766 gattataaaattgggtgttgtatcaccgaattcgcggtcccccacgttatcgattccttt 825 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4479 gattataaaatt-ggtgttgtatcaccgaattcgcggtcccccacgttatcgattccttt 4537 Query: 826 ctctgatcccgataacactcagactatttac-attacgcagtatcggacaacatt-acca 883 |||||||||||||||||||||||||||| | || |||||||||||||||||||| |||| Sbjct: 4538 ctctgatcccgataacactcagactattaccaataacgcagtatcggacaacattaacca 4597 Query: 884 tcaactgtcgctaatagacct 904 ||| ||||||||||||||||| Sbjct: 4598 tcacctgtcgctaatagacct 4618 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7556 Number of Sequences: 1807 Number of extensions: 7556 Number of successful extensions: 83 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)