BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZE10FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1758 1172 0.0 >3x_Contig1758 Length = 25930 Score = 1172 bits (591), Expect = 0.0 Identities = 687/707 (97%), Gaps = 9/707 (1%) Strand = Plus / Minus Query: 70 tcttatccttatcgtggtggttattaaaccgtggatacctacaatacaagagtatcattg 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7479 tcttatccttatcgtggtggttattaaaccgtggatacctacaatacaagagtatcattg 7420 Query: 130 aacaattggtgaaagaagagttccaaaattcgaacccaagagatatcatgacaatggatg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7419 aacaattggtgaaagaagagttccaaaattcgaacccaagagatatcatgacaatggatg 7360 Query: 190 agttcagtggcaagataagcaagatattcgtcaccacaaacaagcaattctttcaacagc 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7359 agttcagtggcaagataagcaagatattcgtcaccacaaacaagcaattctttcaacagc 7300 Query: 250 cacaatcgaatgaaatgttcatttcatgtctacttcctgaacctaacttagagagatttg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7299 cacaatcgaatgaaatgttcatttcatgtctacttcctgaacctaacttagagagatttg 7240 Query: 310 ttcttcaacaaactttagaacaagatgctttgaaagtactatacgaggataatctattac 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7239 ttcttcaacaaactttagaacaagatgctttgaaagtactatacgaggataatctattac 7180 Query: 370 taaaacaacttgtacaagagaccaacaaatgcctacaatcacctggaacatggattgtcc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7179 taaaacaacttgtacaagagaccaacaaatgcctacaatcacctggaacatggattgtcc 7120 Query: 430 tggagtctttaatcgatgaaacattccacacaatcatggaacaaatcgaggataatgtca 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7119 tggagtctttaatcgatgaaacattccacacaatcatggaacaaatcgaggataatgtca 7060 Query: 490 acagcaaatcgaaacctaaatcgaatgatgacgacaccaaagtagtcgatatatccaaaa 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7059 acagcaaatcgaaacctaaatcgaatgatgacgacaccaaagtagtcgatatatccaaaa 7000 Query: 550 attcatatcaaatcgcattattctcttatc-ccacgaaagactgcacaaacgaaatgttg 608 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 6999 attcatatcaaatcgcattattctc-tatcgccacgaaagactgcacaaacgaaatgttg 6941 Query: 609 aaagcgggactcgtatcaatgaacaacaagtttctacagaaactacacttccttctcggc 668 |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| Sbjct: 6940 aaagcgggactcgtatcaatgaacaacaagttcctacagaaactacac-tccatctcggc 6882 Query: 669 acttgacgattctcagtgcctggcttttatagtaacttcggtccattaaaacctttactt 728 ||||||||| ||||||||| | || | |||||||||||||||| || |||||| |||||| Sbjct: 6881 acttgacga-tctcagtgcat-gcgtatatagtaacttcggtctatgaaaacc-ttactt 6825 Query: 729 ggcccctcattccaagtacggaaaatcgctccattaccgggtatgta 775 ||||| |||| ||||||| | ||||||||||| ||||| ||||||| Sbjct: 6824 ggccctccatt-caagtactg-aaatcgctcca-taccgtgtatgta 6781 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7653 Number of Sequences: 1807 Number of extensions: 7653 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)