BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZF05FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1563 1334 0.0 >3x_Contig1563 Length = 10839 Score = 1334 bits (673), Expect = 0.0 Identities = 703/712 (98%), Gaps = 1/712 (0%) Strand = Plus / Minus Query: 168 ccatactagtatctaaacttcacgtttactcgcagtttgatacagcagactccaacagag 227 |||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| Sbjct: 5431 ccatactaatatctaaacttcaagtttactcgcagtttgataca-caaactccaacagag 5373 Query: 228 agagcttttccctctatgttcacctccgattctgatataagcgactcaattgactctgat 287 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5372 agagcttttccctctatgttcagctccgattctgatataagcgactcaattgactctgat 5313 Query: 288 gtcggagatcagctaaagagacggtcttcttcaatactgcgcaaaatgtttaataggtca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5312 gtcggagatcagctaaagagacggtcttcttcaatactgcgcaaaatgtttaataggtca 5253 Query: 348 aagaaactactgccaaaactacacaagaggtgaaacgtatgagcagttgtgctgctggat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5252 aagaaactactgccaaaactacacaagaggtgaaacgtatgagcagttgtgctgctggat 5193 Query: 408 aatggaggagcttctcttttcatactactccgtcttatatcaaaatttctacgctcactt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5192 aatggaggagcttctcttttcatactactccgtcttatatcaaaatttctacgctcactt 5133 Query: 468 ctgagcttttcagcagggaaggtagaaaaaaattttgacacattgacgaaaacagattga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5132 ctgagcttttcagcagggaaggtagaaaaaaattttgacacattgacgaaaacagattga 5073 Query: 528 taacacttaagacctttgataaagctttgaatgacacctactctttgatttcatattgga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5072 taacacttaagacctttgataaagctttgaatgacacctactctttgatttcatattgga 5013 Query: 588 tttttcactatataagacaactggggtgatatatccagagaaccaattaggtattggaat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5012 tttttcactatataagacaactggggtgatatatccagagaaccaattaggtattggaat 4953 Query: 648 agtttatacctgattcactgaaagatggctgacgttaagattcaaactctaccaaccgac 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4952 agtttatacctgattcactgaaagatggctgacgttaagattcaaactctaccaaccgac 4893 Query: 708 tttagggccaaccattatgagattgaattgagtgagttagatgctgagcacaattcattt 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4892 tttagggccaaccattatgagattgaattgagtgagttagatgctgagcacaattcattt 4833 Query: 768 atcggatccgtgcgtattattatgtccactgttaatgccaatgacatgatttcattgaat 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4832 atcggatccgtgcgtattattatgtccactgttaatgccaatgacatgatttcattgaat 4773 Query: 828 atnagggacattgagatcgtttctgtcgtggttgaactgaaaaaggggtctg 879 || |||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 4772 atgagggacattgagatcgtttctgcggtggttgaactgaaagaggggtctg 4721 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6377 Number of Sequences: 1807 Number of extensions: 6377 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)