BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZF05RM1.SCF screened BAC_end
         (953 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig893                                                         1302   0.0  

>3x_Contig893 
          Length = 2804

 Score = 1302 bits (657), Expect = 0.0
 Identities = 756/779 (97%), Gaps = 8/779 (1%)
 Strand = Plus / Plus

                                                                        
Query: 52   gctttggaaagatcaaaaccgtattcagcgagaatggtaaagcataaggaaatttatgat 111
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2024 gctttggaaagatcaaaaccgtatacagcgagaatggtaaagcataaggaaatttatgat 2083

                                                                        
Query: 112  tagaatacacctctgcgtaatggttggcggtatcatgtatgtatgaagggtatgtatata 171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2084 tagaatacacctctgcgtaatggttggcggtatcatgtatgtatgaagggtatgtatata 2143

                                                                        
Query: 172  tgtacggctggatggatattgtgaatgaggtccctgttgcaatttttctcattttttctc 231
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 2144 tgtacggctggatggatattgtgaatgaggtccctgttgcaatttttctcatttcttc-c 2202

                                                                        
Query: 232  atggtgatttgaaagcccaattcccgagacgatttccctttggattggtggcatctttgg 291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 atggtgatttgaaagcccaattcccgagacgatttccctttggattggtggcatctttgg 2262

                                                                        
Query: 292  tccaagtcttacctgtgcgtaattcatagttctctttttctaattcgtcaaggcgtgttc 351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 tccaagtcttacctgtgcgtaattcatagttctctttttctaattcgtcaaggcgtgttc 2322

                                                                        
Query: 352  tgagctcttgattttcgtccataacttccagatttctttccattgttctattcaaatctg 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 tgagctcttgattttcgtccataacttccagatttctttccattgttctattcaaatctg 2382

                                                                        
Query: 412  ctttcaaatctgtgggaatttcagcatctggattaggtaacgtttgtttataaagttcac 471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2383 ctttcaaatctgtgggaatttcagcatctggattaggtaacgtttgtttataaagttcac 2442

                                                                        
Query: 472  gttccagttgtttcttcaaatcttctatctctagtaataaatccttattttcgtcctgaa 531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2443 gttccagttgtttcttcaaatcttctatctctagtaataaatccttattttcgtcctgaa 2502

                                                                        
Query: 532  gagtttccatccgaagtctgttttcaattagttcattggcaatagtgatatgctctctgt 591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2503 gagtttccatccgaagtctgttttcaattagttcattggcaatagtgatatgctctctgt 2562

                                                                        
Query: 592  ttaatagcgaatagtcattttctaa-tttcttcaactctttttgaagctgnnctgtttt- 649
            ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| 
Sbjct: 2563 ttaatagcgaatagtcattttctaattttcttcaactctttttgaagctg-tctgtttta 2621

                                                                        
Query: 650  aatcctttgntcctcatattggtggtcctttttccgtttccaactttgtgaatctcatcg 709
            ||| ||||| ||||||||||| || ||| ||||||||||||||| |||||||||||||||
Sbjct: 2622 aattctttgttcctcatattgttgttcc-ttttccgtttccaac-ttgtgaatctcatcg 2679

                                                                        
Query: 710  tactctttcacgtaacgctcc-atttgcaatggagttaatttgatttccaaccaatcaga 768
            ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||
Sbjct: 2680 tactctttcacgtaacgctccaaattgcaatggagttaatttgatttccaacgaatcaga 2739

                                                                       
Query: 769  gatgaatctattcatatcggactcttctgggttcttccttagaagcataaggttggaaa 827
            |||||||||||  |||||| ||||||||||| || ||||||||||||||  ||||||||
Sbjct: 2740 gatgaatctatcaatatcgtactcttctggggtc-tccttagaagcatagtgttggaaa 2797


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8639
Number of Sequences: 1807
Number of extensions: 8639
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)