BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZF09RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1097 1285 0.0 >3x_Contig1097 Length = 4271 Score = 1285 bits (648), Expect = 0.0 Identities = 720/736 (97%), Gaps = 6/736 (0%) Strand = Plus / Minus Query: 43 gcttttgttgatgcaacaccgttttctggaccagcattgatgtggacaccgcagtgagta 102 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2416 gcttttgttgatgcaacaccgatttctggaccagcattgatgtggacaccgcagtgagta 2357 Query: 103 cttctagaaatggaagaaccaacactgttcacgatacccaaggtcaatgcacctctttcc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2356 cttctagaaatggaagaaccaacactgttcacgatacccaaggtcaatgcacctctttcc 2297 Query: 163 aaacagtaattcaaggacaacatggtgtcagcagtttcaccggattgggaaacattatat 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 2296 aaacagtaattcaaggacaacatggtgtcagcagtttcaccggattgggaaacaaaa-at 2238 Query: 223 acaaacatcgtctctaaagattgggcattttctatccaagaaatctgacgctaattccac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 acaaacatcgtctctaaagattgggcattttctatccaagaaatctgacgctaattccac 2178 Query: 283 tgatactggaatctccgttagctcttcgaaaatggctcttgtagctaaacaagagtgata 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2177 tgatactggaatctccgttagctcttcgaaaatggctcttgtagctaaacaagagtgata 2118 Query: 343 agaagtaccacaggcgatcattattaatctacgagctttcctgatggcagacaatctaga 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2117 agaagtaccacaggcgatcattattaatctacgagctttcctgatggcagacaatctaga 2058 Query: 403 ctttagaccacccaagttgaccagattgtgttcaaaatctattctacctctcatggtgtt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2057 ctttagaccacccaagttgaccagattgtgttcaaaatctattctacctctcatggtgtt 1998 Query: 463 caaagtagattctggttgttcataaatttccttttgcatgaaatgttggtatggaccctt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1997 caaagtagattctggttgttcataaatttccttttgcatgaaatgttggtatggaccctt 1938 Query: 523 cataatttgagccaattccatctcaagggtttgaatggatctggtggcagattctgtcaa 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1937 cataatttgagccaattccatctcaagggtttgaatggatctggtggcagattctgtcaa 1878 Query: 583 ttttttgttagctctatggatgtgcaattcaccgtcgtagatgtgagcaatatcatcgtc 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1877 ttttttgttagctctatggatgtgcaattcaccgtcgtagatgtgagcaatatcatcgtc 1818 Query: 643 ttccaagaacaagacctttttggtgtgtttttacatggaggcagcatcactggaaaggaa 702 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct: 1817 ttccaagaacaagaccttcttggtgtgttttacaatggaggcagcatcactggaaagg-a 1759 Query: 703 aaaattcgattggagatgggagaaccgtctttttgataagaaaagctcttgatttgagat 762 ||||||||||||||||| ||||||||||| || ||||||| ||||||||||| ||||||| Sbjct: 1758 aaaattcgattggagat-ggagaaccgtc-ttctgataag-aaagctcttga-ttgagat 1703 Query: 763 ctacgccaagtacttt 778 |||||| | ||||||| Sbjct: 1702 ctacgcaaggtacttt 1687 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7503 Number of Sequences: 1807 Number of extensions: 7503 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)