BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZF11RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1798 1336 0.0 >3x_Contig1798 Length = 38968 Score = 1336 bits (674), Expect = 0.0 Identities = 741/758 (97%), Gaps = 4/758 (0%) Strand = Plus / Minus Query: 53 catccactttttcgaccgtacctgatcttggaaaaccatcgaatccttacaagtgtgttg 112 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8017 catccacttctccgaccgtacctgatcttggaaaaccatcgaatccttacaagtgtgttg 7958 Query: 113 aatatctggattatgacggtagcagaatttaaagaaattgaactgaggcatttcactcgg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7957 aatatctggattatgacggtagcagaatttaaagaaattgaactgaggcatttcactcgg 7898 Query: 173 aagctgtatttcctcattgttttgattgaccttggaagctttgtttcgtagaatttcccc 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7897 aagctgtatttcctcattgttttgattgaccttggaagctttgtttcgtagaatttcccc 7838 Query: 233 cttcccatcagtatcctgtcgttgatctgacactccattcgaatctacatcttcgaactt 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7837 cttcccatcagtatcctgtcgttgatctgacactccattcgaatctacatcttcgaactt 7778 Query: 293 acgctttaaatccggtctgcatgtctgttgaaggttaaactccattttgaaatacgatcg 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7777 acgctttaaatccggtctgcatgtctgttgaaggttaaactccattttgaaatacgatcg 7718 Query: 353 taactcgtatggtatatttgaatatattgatgagataaaatgatggggtatattgactca 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7717 taactcgtatggtatatttgaatatattgatgagataaaatgatggggtatattgactca 7658 Query: 413 aaacaacttccctagcgttctctttccaaaatgtttattctgttcctcaaacttttgtaa 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7657 aaacaacttccctagcgttctctttccaaaatgtttattctgttcctcaaacttttgtaa 7598 Query: 473 atataccagaaccagtgatcaaagtgatgcagtactgcaaaacccttcgtttatgtctct 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7597 atataccagaaccagtgatcaaagtgatgcagtactgcaaaacccttcgtttatgtctct 7538 Query: 533 tatccacaaggatataattcctttccttgattcacaggaaaattctataagaacaccacc 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7537 tatccacaaggatataattcctttccttgattcacaggaaaattctataagaacaccacc 7478 Query: 593 aatgatgagcactagtacctttctttaccgaaacttgttgttcttccctatctgagctct 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7477 aatgatgagcactagtacctttctttaccgaaacttgttgttcttccctatctgagctct 7418 Query: 653 ctccgctgctgatctttcgtttgttctg-aaatttccaaaccgcttaa-acaacaaatat 710 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 7417 ctccgctgctgatctttcgtttgttctgaaaatttccaaaccgcttaatacaacaaatat 7358 Query: 711 tatgctttat-ttaatcaaacaaactattggtaaatccggaaatgagacccccctttaag 769 ||||||||| | |||||||||||||||||||| ||| |||| |||||| |||||||||| Sbjct: 7357 gatgctttatataaatcaaacaaactattggtagatcgggaagtgagacgcccctttaag 7298 Query: 770 gattaaaaaattttacttttggcagcgttttttctttt 807 |||||| || | |||| |||||||| |||||| ||||| Sbjct: 7297 gattaagaagtcttac-tttggcagtgtttttcctttt 7261 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,032 Number of Sequences: 1807 Number of extensions: 15032 Number of successful extensions: 174 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)