BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZF12FM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1575                                                        1501   0.0  

>3x_Contig1575 
          Length = 11952

 Score = 1501 bits (757), Expect = 0.0
 Identities = 790/799 (98%), Gaps = 2/799 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5962 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 5903

                                                                        
Query: 148  gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5902 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 5843

                                                                        
Query: 208  aagttgaagattttttaatattagcatagaggccaaaatccaacaaaaattatactctat 267
            |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5842 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 5783

                                                                        
Query: 268  actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5782 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 5723

                                                                        
Query: 328  ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5722 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 5663

                                                                        
Query: 388  gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5662 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 5603

                                                                        
Query: 448  tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 5543

                                                                        
Query: 508  tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 5483

                                                                        
Query: 568  ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 5423

                                                                        
Query: 628  tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5422 tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 5363

                                                                        
Query: 688  gttgacacatacttatctgagttctaactagctagtttgggaaagttttggtttggtttg 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5362 gttgacacatacttatctgagttctaactagctagtttgggaaagttttggtttggtttg 5303

                                                                        
Query: 748  accagcgacaatacttagaaatggtcagtgtcttggcgacttcagtttacacaatttacc 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5302 accagcgacaatacttagaaatggtcagtgtcttggcgacttcagtttacacaatttacc 5243

                                                                        
Query: 808  cttctgtctcttatatgtatcgctttatatattctgattcccaattnaatggnacttcct 867
            ||||||||||||||||||||||||||||||||||||||| || ||| ||| | |||||||
Sbjct: 5242 cttctgtctcttatatgtatcgctttatatattctgatt-cctatttaattggacttcct 5184

                               
Query: 868  gtccttttcatatttgccg 886
            |||| ||||||||||||||
Sbjct: 5183 gtcc-tttcatatttgccg 5166


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,574
Number of Sequences: 1807
Number of extensions: 22574
Number of successful extensions: 524
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)