BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZG01FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig886 1376 0.0 >3x_Contig886 Length = 4262 Score = 1376 bits (694), Expect = 0.0 Identities = 805/833 (96%), Gaps = 7/833 (0%) Strand = Plus / Plus Query: 87 tttttagattttgtacacttttttttttgtcctactacgctttcggacattttctgtctt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1858 tttttagattttgtacacttttttttttgtcctactacgctttcggacattttctgtctt 1917 Query: 147 tcttagcttctattgatagcaaaaaaaaaggttcaaatcaaaagtcacggatacaagata 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 tcttagcttctattgatagcaaaaaaaaaggttcaaatcaaaagtcacggatacaagata 1977 Query: 207 taacctagctgacgattactactggcgaaacactcacaagacagagttttactagttgat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1978 taacctagctgacgattactactggcgaaacactcacaagacagagttttactagttgat 2037 Query: 267 aaaag-ttaaacaaaatattagccacacccatagagtttacgcttttcaaactgctcaca 325 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2038 aaaaggttaaacaaaatattagccacacccatagagtttacgcttttcaaactgctcaca 2097 Query: 326 ccgaaaaacaaaaacccttttcttactttactatcttttttttttgattttatttcttcg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2098 ccgaaaaacaaaaacccttttcttactttactatcttttttttttgattttatttcttcg 2157 Query: 386 gtttaggtttttccttatttgacagaaaataggcaaaagatatagcaacctacctccgca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2158 gtttaggtttttccttatttgacagaaaataggcaaaagatatagcaacctacctccgca 2217 Query: 446 aaaaaaggaaaaaggtatctgaactgctatttggaaatcaaaccttacatctgtttttac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2218 aaaaaaggaaaaaggtatctgaactgctatttggaaatcaaaccttacatctgtttttac 2277 Query: 506 ctgctattttttttttttttggtgtttgattttaccgtgcaacaagatccgattcagaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2278 ctgctattttttttttttttggtgtttgattttaccgtgcaacaagatccgattcagaag 2337 Query: 566 gaaaatcttggtgaaggaaaatctgaaaatatcagacgggcaagtcctcattactgcact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2338 gaaaatcttggtgaaggaaaatctgaaaatatcagacgggcaagtcctcattactgcact 2397 Query: 626 aaacaaacaaaaaattctgcatctttcttttgctcttctgttgcttttaattagaacctt 685 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2398 aaacaaacaaaaaattctgcatctttcttttgctcttctgttgcttttaattagagcctt 2457 Query: 686 tcctttc-tttntttcacatttttttgctttaatcggaaaaaatccagctctttgtcttt 744 ||||| | ||| |||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 2458 tccttccttttttttcacatttttttgctttattcggaaaaatcccagctctctgtcttt 2517 Query: 745 ttacagggtggactgacaaga-ttatattaaaatcagcctttggattgcaacggaaaa-c 802 |||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||| | Sbjct: 2518 ttacagggtgtactgacaagatttatattagaatcagcctttgcattgcaacggaaaagc 2577 Query: 803 ttaaacgacccaagtccaggccccatttttaggaaatattgatctggatttgattgggcc 862 | ||||||| ||||| ||||| | ||||||||||||||||||||| ||| ||||| |||| Sbjct: 2578 taaaacgacacaagtacaggcacaatttttaggaaatattgatct-gatctgatttggcc 2636 Query: 863 agaccagacctttttttgaataacccccgaacaaaaccggccggataaacgat 915 |||||||||| | ||||||||||| | ||| ||||| |||||||||||||||| Sbjct: 2637 agaccagacc-tattttgaataacgcacgagcaaaa-cggccggataaacgat 2687 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 19,432 Number of Sequences: 1807 Number of extensions: 19432 Number of successful extensions: 474 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)