BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZG03RM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1361                                                        1604   0.0  

>3x_Contig1361 
          Length = 8765

 Score = 1604 bits (809), Expect = 0.0
 Identities = 855/864 (98%), Gaps = 5/864 (0%)
 Strand = Plus / Minus

                                                                        
Query: 42   gcttcggaactttaccaatcgtttgattttagtttcaaaacttcaacaaacttggagtgt 101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5464 gcttcggaactttaccaatcgtttgattttagtttcaaaacttcaacaaacttggagtgt 5405

                                                                        
Query: 102  tggtggtgaagtggaggcaagttgaacatcggtctaacacaaatagagactacgtcgtca 161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5404 tggtggtgaagtggaggcaagttgaacatcggtctaacacaaatagagactacgtcgtca 5345

                                                                        
Query: 162  aatagttcatcaattagattttttagatcatcgcctgtttgtttgaagtctggtaatgcg 221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5344 aatagttcatcaattagattttttagatcatcgcctgtttgtttgaagtctgggaatgcg 5285

                                                                        
Query: 222  ttgacttccaataatttgacttgataatcggaatcaacaaggaaatcgaagccaaacgtc 281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5284 ttgacttccaataatttgacttgataatcggaatcaacaaggaaatcgaagccaaacgtc 5225

                                                                        
Query: 282  tccaaactattcttcagtgggcggaaatttaggcgatcaacattaactgcagctttgaac 341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5224 tccaaactattcttcagtgggcggaaatttaggcgatcaacattaactgcagctttgaac 5165

                                                                        
Query: 342  agttcagaaactgcttcgtgaatttgagtcctaatttcttcccttctatgcgaaggaata 401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5164 agttcagaaactgcttcgtgaatttgagtcctaatttcttcccttctatgcgaaggaata 5105

                                                                        
Query: 402  tccttcaaggcatcaaactcgatcacagaatttgatttaatatcatcatccgtttgcaag 461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5104 tccttcaaggcatcaaactcgatcacagaatttgatttaatatcatcatccgtttgcaag 5045

                                                                        
Query: 462  caagtattagtcaaatgacaagctaattgctcaatatctaaaacgtcatattcttcggta 521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5044 caagtattagtcaaatgacaagctaattgctcaatatctaaaacgtcatattcttcggta 4985

                                                                        
Query: 522  ggtggtacaaatttgttgggagcgaaaagtgctagcattctatcataaacaaacacctgt 581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 ggtggtacaaatttgttgggagcgaaaagtgctagcattctatcataaacaaacacctgt 4925

                                                                        
Query: 582  agatcgccactgcaggtaacataacatctgatatgaaatttcctgccatgtgcttcactc 641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4924 agatcgccactgcaggtaacataacatctgatatgaaatttcctgccatgtgcttcactc 4865

                                                                        
Query: 642  aataaaagaggattgtgtaagtattcttggacgatgaaatggcgtaattgagaagtggcc 701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 aataaaagaggattgtgtaagtattcttggacgatgaaatggcgtaattgagaagtggcc 4805

                                                                        
Query: 702  actttattagtattcgtctcagtgtcctcatcatcagtttcatcttcttc-aacgagtc- 759
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 4804 actttattagtattcgtctcagtgtcctcatcatcagtttcatcttcttcaaacgagtca 4745

                                                                        
Query: 760  anaatagcttgtaattgttcaatagttttgaatatgcggataccttgacccttatcactc 819
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4744 aaaatagcttgtaattgttcaatagttttgaatatgcggataccttgacccttatcactc 4685

                                                                        
Query: 820  atactaggctttcaggatccaccatttctctttttgattcaagctcttgcccttatttcc 879
            ||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||| ||||
Sbjct: 4684 atactaggc-ttcaagatccaccatttctc-ttttgattcaagctcttg-ccttaattcc 4628

                                    
Query: 880  cagttttcatcaagtgcatcgtcc 903
            ||||||||||||||||||||||||
Sbjct: 4627 cagttttcatcaagtgcatcgtcc 4604


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7472
Number of Sequences: 1807
Number of extensions: 7472
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)