BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZG03RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1361 1604 0.0 >3x_Contig1361 Length = 8765 Score = 1604 bits (809), Expect = 0.0 Identities = 855/864 (98%), Gaps = 5/864 (0%) Strand = Plus / Minus Query: 42 gcttcggaactttaccaatcgtttgattttagtttcaaaacttcaacaaacttggagtgt 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5464 gcttcggaactttaccaatcgtttgattttagtttcaaaacttcaacaaacttggagtgt 5405 Query: 102 tggtggtgaagtggaggcaagttgaacatcggtctaacacaaatagagactacgtcgtca 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5404 tggtggtgaagtggaggcaagttgaacatcggtctaacacaaatagagactacgtcgtca 5345 Query: 162 aatagttcatcaattagattttttagatcatcgcctgtttgtttgaagtctggtaatgcg 221 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5344 aatagttcatcaattagattttttagatcatcgcctgtttgtttgaagtctgggaatgcg 5285 Query: 222 ttgacttccaataatttgacttgataatcggaatcaacaaggaaatcgaagccaaacgtc 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5284 ttgacttccaataatttgacttgataatcggaatcaacaaggaaatcgaagccaaacgtc 5225 Query: 282 tccaaactattcttcagtgggcggaaatttaggcgatcaacattaactgcagctttgaac 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5224 tccaaactattcttcagtgggcggaaatttaggcgatcaacattaactgcagctttgaac 5165 Query: 342 agttcagaaactgcttcgtgaatttgagtcctaatttcttcccttctatgcgaaggaata 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5164 agttcagaaactgcttcgtgaatttgagtcctaatttcttcccttctatgcgaaggaata 5105 Query: 402 tccttcaaggcatcaaactcgatcacagaatttgatttaatatcatcatccgtttgcaag 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5104 tccttcaaggcatcaaactcgatcacagaatttgatttaatatcatcatccgtttgcaag 5045 Query: 462 caagtattagtcaaatgacaagctaattgctcaatatctaaaacgtcatattcttcggta 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5044 caagtattagtcaaatgacaagctaattgctcaatatctaaaacgtcatattcttcggta 4985 Query: 522 ggtggtacaaatttgttgggagcgaaaagtgctagcattctatcataaacaaacacctgt 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4984 ggtggtacaaatttgttgggagcgaaaagtgctagcattctatcataaacaaacacctgt 4925 Query: 582 agatcgccactgcaggtaacataacatctgatatgaaatttcctgccatgtgcttcactc 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4924 agatcgccactgcaggtaacataacatctgatatgaaatttcctgccatgtgcttcactc 4865 Query: 642 aataaaagaggattgtgtaagtattcttggacgatgaaatggcgtaattgagaagtggcc 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4864 aataaaagaggattgtgtaagtattcttggacgatgaaatggcgtaattgagaagtggcc 4805 Query: 702 actttattagtattcgtctcagtgtcctcatcatcagtttcatcttcttc-aacgagtc- 759 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4804 actttattagtattcgtctcagtgtcctcatcatcagtttcatcttcttcaaacgagtca 4745 Query: 760 anaatagcttgtaattgttcaatagttttgaatatgcggataccttgacccttatcactc 819 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4744 aaaatagcttgtaattgttcaatagttttgaatatgcggataccttgacccttatcactc 4685 Query: 820 atactaggctttcaggatccaccatttctctttttgattcaagctcttgcccttatttcc 879 ||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 4684 atactaggc-ttcaagatccaccatttctc-ttttgattcaagctcttg-ccttaattcc 4628 Query: 880 cagttttcatcaagtgcatcgtcc 903 |||||||||||||||||||||||| Sbjct: 4627 cagttttcatcaagtgcatcgtcc 4604 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7472 Number of Sequences: 1807 Number of extensions: 7472 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)