BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZG05RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1731 1457 0.0 >3x_Contig1731 Length = 24233 Score = 1457 bits (735), Expect = 0.0 Identities = 797/814 (97%), Gaps = 3/814 (0%) Strand = Plus / Plus Query: 47 tgaagtctttcatcaaggaataatacccagttggtgaaaacttcgacacccaattcaacc 106 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20923 tgaagtctttcatcaaggaaaaatacccagttggtgaaaacttcgacacccaattcaacc 20982 Query: 107 tggctgtcaagagagggttggagactgagttcttctctcaaccaaagggacctgctggtt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20983 tggctgtcaagagagggttggagactgagttcttctctcaaccaaagggacctgctggtt 21042 Query: 167 ctatcaaattggtgaaaaaaccaaaggctgagtccaagaaggcagctccttctgctgtta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21043 ctatcaaattggtgaaaaaaccaaaggctgagtccaagaaggcagctccttctgctgtta 21102 Query: 227 agaaatcttctactaccaagaagccagctgccaccaccaagaagagctctactagttcaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21103 agaaatcttctactaccaagaagccagctgccaccaccaagaagagctctactagttcaa 21162 Query: 287 aaaaggcttctgctggtaaggtcgtcaagaaggagtcttcaaagaagaccactgctaaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21163 aaaaggcttctgctggtaaggtcgtcaagaaggagtcttcaaagaagaccactgctaaga 21222 Query: 347 aagcagctaccaagaaggctcctgctaagaagactgccgttaagaagtccaagaaataaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21223 aagcagctaccaagaaggctcctgctaagaagactgccgttaagaagtccaagaaataaa 21282 Query: 407 gttaatcaaatttcgaatcactttatttttttacctcctgtgaatatcgattcacctaac 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21283 gttaatcaaatttcgaatcactttatttttttacctcctgtgaatatcgattcacctaac 21342 Query: 467 ttcttaatgcgtgtgttgtattttactaccttcctttgatacttctgtctacccttaata 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21343 ttcttaatgcgtgtgttgtattttactaccttcctttgatacttctgtctacccttaata 21402 Query: 527 attcagttcaaatcggttatttttgtgttatttaaatcaattataccctttatcaccact 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21403 attcagttcaaatcggttatttttgtgttatttaaatcaattataccctttatcaccact 21462 Query: 587 ctattattttcttccttgaaaaattgtctttctgttgaaatatattccacccctttcctg 646 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 21463 ctattattttcttccttgaaaaattgtctttctgttgaaatatattccacccc-ttcctg 21521 Query: 647 tcctttaccctacttattccttttgactacattcaccatcatttattccaacccaaacct 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21522 tcctttaccctacttattccttttgactacattcaccatcatttattccaacccaaacct 21581 Query: 707 tctatctctaactgnggtctctctgttactcctcctttcatcttttcttttaactcacgg 766 |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21582 cctatctcttactgtggtctctctgttactcctcctttcatcttttcttttaactcacgg 21641 Query: 767 gaatttttaaatgagaacacaccactttagatttttgacctgtggaaatttaacatttag 826 |||||| ||||||||||||||||| ||||||| ||||| ||| || |||||| |||| Sbjct: 21642 aaattttaaaatgagaacacaccac-ttagattattgactagtgtaatattaaca-ttag 21699 Query: 827 cggatttttaaatcaatcccctcttctttattga 860 ||||||| ||||||||||| |||||||||||||| Sbjct: 21700 cggatttctaaatcaatccgctcttctttattga 21733 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8227 Number of Sequences: 1807 Number of extensions: 8227 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)