BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZG05RM1.SCF screened BAC_end
         (943 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1731                                                        1457   0.0  

>3x_Contig1731 
          Length = 24233

 Score = 1457 bits (735), Expect = 0.0
 Identities = 797/814 (97%), Gaps = 3/814 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    tgaagtctttcatcaaggaataatacccagttggtgaaaacttcgacacccaattcaacc 106
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 20923 tgaagtctttcatcaaggaaaaatacccagttggtgaaaacttcgacacccaattcaacc 20982

                                                                         
Query: 107   tggctgtcaagagagggttggagactgagttcttctctcaaccaaagggacctgctggtt 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20983 tggctgtcaagagagggttggagactgagttcttctctcaaccaaagggacctgctggtt 21042

                                                                         
Query: 167   ctatcaaattggtgaaaaaaccaaaggctgagtccaagaaggcagctccttctgctgtta 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21043 ctatcaaattggtgaaaaaaccaaaggctgagtccaagaaggcagctccttctgctgtta 21102

                                                                         
Query: 227   agaaatcttctactaccaagaagccagctgccaccaccaagaagagctctactagttcaa 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21103 agaaatcttctactaccaagaagccagctgccaccaccaagaagagctctactagttcaa 21162

                                                                         
Query: 287   aaaaggcttctgctggtaaggtcgtcaagaaggagtcttcaaagaagaccactgctaaga 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21163 aaaaggcttctgctggtaaggtcgtcaagaaggagtcttcaaagaagaccactgctaaga 21222

                                                                         
Query: 347   aagcagctaccaagaaggctcctgctaagaagactgccgttaagaagtccaagaaataaa 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21223 aagcagctaccaagaaggctcctgctaagaagactgccgttaagaagtccaagaaataaa 21282

                                                                         
Query: 407   gttaatcaaatttcgaatcactttatttttttacctcctgtgaatatcgattcacctaac 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21283 gttaatcaaatttcgaatcactttatttttttacctcctgtgaatatcgattcacctaac 21342

                                                                         
Query: 467   ttcttaatgcgtgtgttgtattttactaccttcctttgatacttctgtctacccttaata 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21343 ttcttaatgcgtgtgttgtattttactaccttcctttgatacttctgtctacccttaata 21402

                                                                         
Query: 527   attcagttcaaatcggttatttttgtgttatttaaatcaattataccctttatcaccact 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21403 attcagttcaaatcggttatttttgtgttatttaaatcaattataccctttatcaccact 21462

                                                                         
Query: 587   ctattattttcttccttgaaaaattgtctttctgttgaaatatattccacccctttcctg 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 21463 ctattattttcttccttgaaaaattgtctttctgttgaaatatattccacccc-ttcctg 21521

                                                                         
Query: 647   tcctttaccctacttattccttttgactacattcaccatcatttattccaacccaaacct 706
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21522 tcctttaccctacttattccttttgactacattcaccatcatttattccaacccaaacct 21581

                                                                         
Query: 707   tctatctctaactgnggtctctctgttactcctcctttcatcttttcttttaactcacgg 766
              |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21582 cctatctcttactgtggtctctctgttactcctcctttcatcttttcttttaactcacgg 21641

                                                                         
Query: 767   gaatttttaaatgagaacacaccactttagatttttgacctgtggaaatttaacatttag 826
              |||||| ||||||||||||||||| ||||||| |||||  ||| ||  |||||| ||||
Sbjct: 21642 aaattttaaaatgagaacacaccac-ttagattattgactagtgtaatattaaca-ttag 21699

                                               
Query: 827   cggatttttaaatcaatcccctcttctttattga 860
             ||||||| ||||||||||| ||||||||||||||
Sbjct: 21700 cggatttctaaatcaatccgctcttctttattga 21733


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8227
Number of Sequences: 1807
Number of extensions: 8227
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)