BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC26ZG07RM1.SCF screened BAC_end
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1773 1350 0.0
3x_Contig1124 1326 0.0
3x_Contig1790 1318 0.0
3x_Contig1213 1283 0.0
3x_Contig1805 1275 0.0
>3x_Contig1773
Length = 8694
Score = 1350 bits (681), Expect = 0.0
Identities = 736/749 (98%), Gaps = 4/749 (0%)
Strand = Plus / Plus
Query: 48 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7023 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 7082
Query: 108 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7083 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 7142
Query: 168 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7143 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 7202
Query: 228 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7203 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 7262
Query: 288 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7263 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 7322
Query: 348 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7323 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 7382
Query: 408 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7383 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 7442
Query: 468 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7443 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 7502
Query: 528 acttaatccatgttttctggagcctttaacaat-aatcctgattatgcactgcttttcat 586
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7503 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 7562
Query: 587 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagcttttaga 646
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 7563 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 7622
Query: 647 cttaata-tttcgattgtcttgaagttcaacaaccagtattttttggttatgatcccaca 705
||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 7623 cttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatcccaca 7682
Query: 706 gcctttgtttgagcaattatcttcgcgttgttaacatttatgggaggaagtagatctttt 765
|||| |||||||||||||||||||||| || |||||||||| ||||||||||||||||||
Sbjct: 7683 gcctctgtttgagcaattatcttcgcg-tgataacatttatcggaggaagtagatctttt 7741
Query: 766 tag-aaaaggcttggaacctacgctacct 793
|| ||||||||||| |||||||||||||
Sbjct: 7742 gagaaaaaggcttggcacctacgctacct 7770
>3x_Contig1124
Length = 2635
Score = 1326 bits (669), Expect = 0.0
Identities = 733/749 (97%), Gaps = 4/749 (0%)
Strand = Plus / Plus
Query: 48 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 1699
Query: 108 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 1759
Query: 168 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 1819
Query: 228 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 287
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1820 aatataacgaagctccggtatgtggctagtcatacctgtgcagaaccatgcagaccagtc 1879
Query: 288 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1880 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 1939
Query: 348 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 1999
Query: 408 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 2059
Query: 468 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 2119
Query: 528 acttaatccatgttttctggagcctttaacaat-aatcctgattatgcactgcttttcat 586
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2120 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 2179
Query: 587 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagcttttaga 646
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2180 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 2239
Query: 647 cttaata-tttcgattgtcttgaagttcaacaaccagtattttttggttatgatcccaca 705
||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2240 cttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatcccaca 2299
Query: 706 gcctttgtttgagcaattatcttcgcgttgttaacatttatgggaggaagtagatctttt 765
|||| |||||||||||||||||||||| || |||||| ||| ||||||||||||||||||
Sbjct: 2300 gcctctgtttgagcaattatcttcgcg-tgataacatgtatcggaggaagtagatctttt 2358
Query: 766 tag-aaaaggcttggaacctacgctacct 793
|| ||||||||||| |||||||||||||
Sbjct: 2359 gagaaaaaggcttggcacctacgctacct 2387
>3x_Contig1790
Length = 27369
Score = 1318 bits (665), Expect = 0.0
Identities = 732/749 (97%), Gaps = 4/749 (0%)
Strand = Plus / Plus
Query: 48 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3459 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 3518
Query: 108 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3519 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 3578
Query: 168 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3579 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 3638
Query: 228 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3639 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 3698
Query: 288 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 3758
Query: 348 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3759 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 3818
Query: 408 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 3878
Query: 468 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 3938
Query: 528 acttaatccatgttttctggagcctttaacaat-aatcctgattatgcactgcttttcat 586
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3939 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 3998
Query: 587 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagcttttaga 646
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 3999 tccgtattaggtataatgatttgtggtgttttgggattttcactgatcatagctcttaga 4058
Query: 647 cttaata-tttcgattgtcttgaagttcaacaaccagtattttttggttatgatcccaca 705
||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 4059 cttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatcccaca 4118
Query: 706 gcctttgtttgagcaattatcttcgcgttgttaacatttatgggaggaagtagatctttt 765
|||| |||||||||||||||| ||||| || |||||| ||| ||||||||||||||||||
Sbjct: 4119 gcctctgtttgagcaattatcatcgcg-tgataacatgtatcggaggaagtagatctttt 4177
Query: 766 tag-aaaaggcttggaacctacgctacct 793
|| ||||||||||| |||||||||||||
Sbjct: 4178 gagaaaaaggcttggcacctacgctacct 4206
>3x_Contig1213
Length = 3226
Score = 1283 bits (647), Expect = 0.0
Identities = 731/751 (97%), Gaps = 6/751 (0%)
Strand = Plus / Minus
Query: 48 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgagg-aatgcgg 106
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1677 caagttgtattatcttggcatttctatatctacgtaccttttacatgtgagggaatgcgg 1618
Query: 107 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 1558
Query: 167 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 1498
Query: 227 aaaga-taacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 285
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 aaagaataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 1438
Query: 286 tccagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatc 345
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1437 tccagcgtttattttcgtttcctttttcccttttttgcaacttttgatgttgcctgtatc 1378
Query: 346 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 1318
Query: 406 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 465
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1317 agctgcggggaaagtgtgttcagcttttagacttaattttcacggtactacgtgatctct 1258
Query: 466 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 1198
Query: 526 caacttaatccatgttttctggagcctttaacaat-aatcctgattatgcactgcttttc 584
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1197 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 1138
Query: 585 attccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagctttta 644
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 1137 attccgtattaggtataatgatttggggtgttttgggattttcactgatcatagctctta 1078
Query: 645 gacttaata-tttcgattgtcttgaagttcaacaaccagtattttttggttatgatccca 703
||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1077 gacttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatccca 1018
Query: 704 cagcctttgtttgagcaattatcttcgcgttgttaacatttatgggaggaagtagatctt 763
|||||| |||||||||||||||||||||| || |||||||||| ||||||||||||||||
Sbjct: 1017 cagcctctgtttgagcaattatcttcgcg-tgataacatttatcggaggaagtagatctt 959
Query: 764 tttag-aaaaggcttggaacctacgctacct 793
|| || ||||||||||| |||||||||||||
Sbjct: 958 ttgagaaaaaggcttggcacctacgctacct 928
>3x_Contig1805
Length = 19369
Score = 1275 bits (643), Expect = 0.0
Identities = 730/751 (97%), Gaps = 6/751 (0%)
Strand = Plus / Minus
Query: 48 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgagg-aatgcgg 106
||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 18426 caagttgtattatcttggcatttctatatctacataccttttacatgtgagggaatgcgg 18367
Query: 107 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 18307
Query: 167 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18306 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 18247
Query: 227 aaaga-taacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 285
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18246 aaagaataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 18187
Query: 286 tccagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatc 345
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18186 tccagcgtttattttcgtttcctttttcccttttttgcaacttttgacgttgcctgtatc 18127
Query: 346 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18126 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 18067
Query: 406 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18066 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 18007
Query: 466 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18006 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 17947
Query: 526 caacttaatccatgttttctggagcctttaacaat-aatcctgattatgcactgcttttc 584
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 17946 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 17887
Query: 585 attccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagctttta 644
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 17886 attccgtattaggtataatgatttggggtgttttgggattttcactgatcatagctctta 17827
Query: 645 gacttaata-tttcgattgtcttgaagttcaacaaccagtattttttggttatgatccca 703
||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||
Sbjct: 17826 gacttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatccca 17767
Query: 704 cagcctttgtttgagcaattatcttcgcgttgttaacatttatgggaggaagtagatctt 763
|||||| |||||||||||||||| ||||| || |||||| ||| ||||||||||||||||
Sbjct: 17766 cagcctctgtttgagcaattatcatcgcg-tgataacatgtatcggaggaagtagatctt 17708
Query: 764 tttag-aaaaggcttggaacctacgctacct 793
|| || ||||||||||| |||||||||||||
Sbjct: 17707 ttgagaaaaaggcttggcacctacgctacct 17677
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7268
Number of Sequences: 1807
Number of extensions: 7268
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 5
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)