BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZG09RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1031 1156 0.0 >3x_Contig1031 Length = 5135 Score = 1156 bits (583), Expect = 0.0 Identities = 638/651 (98%), Gaps = 4/651 (0%) Strand = Plus / Plus Query: 48 tagaaaatgaaaaagtgaaagaaattgatgaattagtgaaaaaaaattcgaaatacacag 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 tagaaaatgaaaaagtgaaagaaattgatgaattagtgaaaaaaaattcgaaatacacag 1387 Query: 108 tgggattaacaatatattttcaagaaaaagcttagagcagcttcagtactggttcaagga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 tgggattaacaatatattttcaagaaaaagcttagagcagcttcagtactggttcaagga 1447 Query: 168 ttattcggaaccaacagcaatagcagattctgatcgaactcagaagtataaaatattgaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1448 ttattcggaaccaacagcaatagcagattctgatcgaactcagaagtataaaatattgaa 1507 Query: 228 aagatgagaccaattgttttgaagggtcatgaacgtccattaacgcaagttaagttcaac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1508 aagatgagaccaattgttttgaagggtcatgaacgtccattaacgcaagttaagttcaac 1567 Query: 288 cgtgatggtgacttagtttttgcttgctccaaagatagtgttgcctctatctggtacgct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1568 cgtgatggtgacttagtttttgcttgctccaaagatagtgttgcctctatctggtacgct 1627 Query: 348 atcaacggtgaaagattaggtactctagatgatcattctggtactatctggtctattgat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628 atcaacggtgaaagattaggtactctagatgatcattctggtactatctggtctattgat 1687 Query: 408 gttgatgaaagcacaacttatgcgttgactggtggtgctgatttctgtttcaagatctgg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1688 gttgatgaaagcacaacttatgcgttgactggtggtgctgatttctgtttcaagatctgg 1747 Query: 468 aaagttgctacaggtgtagcagtccattctgtctctaccagaagtccagttttgagagtc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1748 aaagttgctacaggtgtagcagtccattctgtctctaccagaagtccagttttgagagtc 1807 Query: 528 gaattttctccagacggtagcaaacttttgattgtacttgatgcccgtatgggtcacatt 587 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1808 gaattttctccagacggtagcaaacttttgattgtacttgatgccgttatgggtcacatt 1867 Query: 588 ggttccattggttgtttactcttttgatcagaaacgaaaaacgtgaaatcgtgaatgtga 647 ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 1868 ggttccatt-gttgtttactc-tttgatcagaaacgaaaacggtgaaatcgtgaatgtga 1925 Query: 648 aggaaggacccagactacgaaaattccaccattcgagccagctaccaaggt 698 ||| |||| ||||||||||||| | | |||| |||||| |||||||||||| Sbjct: 1926 agg-aggaaccagactacgaaattacaacca-tcgagcaagctaccaaggt 1974 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8075 Number of Sequences: 1807 Number of extensions: 8075 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)