BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZH04FM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1768                                                        1493   0.0  

>3x_Contig1768 
          Length = 25668

 Score = 1493 bits (753), Expect = 0.0
 Identities = 817/831 (98%), Gaps = 6/831 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    tggatatattcatccaatgcatcattcccatcatccaaatcatccttgctgttgtctttt 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24677 tggatatattcatccaatgcatcattcccatcatccaaatcatccttgctgttgtctttt 24618

                                                                         
Query: 147   gtcagaacatgagtatttgtatcgtttctacgcggcttgaataacgttgatgtggaattt 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24617 gtcagaacatgagtatttgtatcgtttctacgcggcttgaataacgttgatgtggaattt 24558

                                                                         
Query: 207   tcatcatcagattcactatcacttcccccaaaagcaggacgttttctcgaacactgtccc 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24557 tcatcatcagattcactatcacttcccccaaaagcaggacgttttctcgaacactgtccc 24498

                                                                         
Query: 267   cttcgtttgttcctgtccctatccgcagactttatactggtaagttttatatccttttgc 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24497 cttcgtttgttcctgtccctatccgcagactttatactggtaagttttatatccttttgc 24438

                                                                         
Query: 327   ttgagttcatcttgttgtttcttcttcttcttccatgcctctagtttcttcagtctctct 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24437 ttgagttcatcttgttgtttcttcttcttcttccatgcctctagtttcttcagtctctct 24378

                                                                         
Query: 387   tccttagcatctacagaaacagatgctgtaacatcattattcagtttctgttttttccac 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24377 tccttagcatctacagaaacagatgctgtaacatcattattcagtttctgttttttccac 24318

                                                                         
Query: 447   ttagcaagtttctcttgcctaatccgtagcttttccgtttgatccataacgctcaccttc 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24317 ttagcaagtttctcttgcctaatccgtagcttttccgtttgatccataacgctcaccttc 24258

                                                                         
Query: 507   gtaatttaattgggtcttttttcttctttctgtgtgctatctttcaagtattaatcctga 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24257 gtaatttaattgggtcttttttcttctttctgtgtgctatctttcaagtattaatcctga 24198

                                                                         
Query: 567   atggttttaaggttttgttaattcaatattataggtattttgatattgaaggaaatcctt 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24197 atggttttaaggttttgttaattcaatattataggtattttgatattgaaggaaatcctt 24138

                                                                         
Query: 627   tccaaatgggtattttaaactactaaatgaagatgggaaacacgctacctagttcattgc 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24137 tccaaatgggtattttaaactactaaatgaagatgggaaacacgctacctagttcattgc 24078

                                                                         
Query: 687   attcagttcatatgacaattgnctatattctttgttatagtgtctaaagttgactgatct 746
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 24077 attcagttcatatgacaattgtctatattctttgttatagtgtctaaagttgactgatc- 24019

                                                                         
Query: 747   ttctaagccat-tattcattatttcttcatttagncttaaataacaacttcc-aagtgac 804
             ||||||  ||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 24018 ttctaaagcatctattcattatttcttcatttagtcttaaataacaacttccaaagtgac 23959

                                                                         
Query: 805   atcttgaagtc-aaatgtacaagaatt-aaaaatgctttatgagagcagttgaaaggact 862
             ||| ||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 23958 atc-tgaagtcaaaatgtacaaggattaaaaaatgctatatgagagcagttgaaaggact 23900

                                                                
Query: 863   cttcatgaaacattccaatttggaaatgaagctgaagcatcctatacgtta 913
             ||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 23899 cttcatgaaacattcgaatatggaaatgaagctgaagcatcctatacgtta 23849


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9314
Number of Sequences: 1807
Number of extensions: 9314
Number of successful extensions: 269
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)