BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZH05RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig945 997 0.0 >3x_Contig945 Length = 3379 Score = 997 bits (503), Expect = 0.0 Identities = 567/583 (97%), Gaps = 4/583 (0%) Strand = Plus / Minus Query: 48 cttaatcttgccacttctttggttaccttttctttcttttcaagttctgttagtggtcta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 cttaatcttgccacttctttggttaccttttctttcttttcaagttctgttagtggtcta 2296 Query: 108 attctatagcccggaattatgcttttaaaaacggtgaccaatgctaatatcgagaacttg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2295 attctatagcccggaattatgcttttaaaaacggtgaccaatgctaatatcgagaacttg 2236 Query: 168 gcagtattcggatttttagagcctgccattttacgtagacgtgtcaatgctgtcgtattt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2235 gcagtattcggatttttagagcctgccattttacgtagacgtgtcaatgctgccgtattt 2176 Query: 228 tcttcggcttcttccataattctttcaactaattctgcaattgtctcttttaattctata 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2175 tcttcggcttcttccataattctttcaactaattctgcaattgtctcttttaattctata 2116 Query: 288 attgtttcttcagtgtctggtacctcgttatcatcttcttcctctcctgacgacgcagct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2115 attgtttcttcagtgtctggtacctcgttatcatcttcttcctctcctgacgacgcagct 2056 Query: 348 ccatccttcgaattttcctcctcgtcatttgattcattgtctgcttcatcttccttagat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2055 ccatccttcgaattttcctcctcgtcatttgattcattgtctgcttcatcttccttagat 1996 Query: 408 ttccggacgtcattcctttgagatttgatgatattcctttccactttaccatttctcttg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1995 ttccggacgtcattcctttgagatttgatgatattcctttccactttaccatttctcttg 1936 Query: 468 ataggtaaaccttctacggcgtctttattatcttgacctttgagagttctaggtttaagt 527 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1935 ataggtaaaccttctacggcgtcttcatcatcttgacctttgagagttctaggtttaagt 1876 Query: 528 tcg-aaacttgctcattgtcattccaggagggattttgaaagcattctttcggttacttt 586 ||| || ||||||||| ||||| |||||| |||||||||| ||||||| ||| ||||| Sbjct: 1875 tcgtaatcttgctcatcgtcatcccagga-ggattttgaaggcattctatcgtctacttc 1817 Query: 587 aacatcctcagtctgggaacaagccagtcttaaagaagggcat 629 |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1816 aacatcctcagtct-ggaacaagccagtc-tcaagaagggcat 1776 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 21,112 Number of Sequences: 1807 Number of extensions: 21112 Number of successful extensions: 2590 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)