BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZH07FM1.SCF screened BAC_end
         (929 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1617                                                        1374   0.0  

>3x_Contig1617 
          Length = 15119

 Score = 1374 bits (693), Expect = 0.0
 Identities = 751/768 (97%), Gaps = 2/768 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   attatacttgtattgattgtaaccagacatttgatgacggtatctcttacaagaaacaca 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3025 attatacttgtattgattgtaaccagacatttgatgacggtatctcttacaagaaacaca 3084

                                                                        
Query: 146  tccagtgcataacagaggatgaaaaatatcagaaaggattatacaagggtaaaaagaacg 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3085 tccagtgcataacagaggatgaaaaatatcagaaaggattatacaagggtaaaaagaacg 3144

                                                                        
Query: 206  gtaatcagaatgaccaaaatggaaaacaaccgaacgctcaagtgaagaaggaagtcaagg 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3145 gtaatcagaatgaccaaaatggaaaacaaccgaacgctcaagtgaagaaggaagtcaagg 3204

                                                                        
Query: 266  tcgaaaagaaagaggaaaagcctgtcaagaaggaatctaaaccagagaagaaggataaga 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3205 tcgaaaagaaagaggaaaagcctgtcaagaaggaatctaaaccagagaagaaggataaga 3264

                                                                        
Query: 326  aggataagaaagacaagaagtcaagcctaatcaagggtgaatcattgtataaaatcttaa 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3265 aggataagaaagacaagaagtcaagcctaatcaagggtgaatcattgtataaaatcttaa 3324

                                                                        
Query: 386  aatctatcaacaataaagacgacaaaaaagaattattgaagaggttgatcgtaacagcgg 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3325 aatctatcaacaataaagacgacaaaaaagaattattgaagaggttgatcgtaacagcgg 3384

                                                                        
Query: 446  aaaacaaaattgagctgcagtaactaaacgaacattcttcgcacattatttgtttacatt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3385 aaaacaaaattgagctgcagtaactaaacgaacattcttcgcacattatttgtttacatt 3444

                                                                        
Query: 506  attttacagatgatttcgtgaagaaatctatactagcgattttaaaagtacataattcat 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3445 attttacagatgatttcgtgaagaaatctatactagcgattttaaaagtacataattcat 3504

                                                                        
Query: 566  taaagagcgtgaaactatcataatcatcacacgctcttagacaaacctttagataattta 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3505 taaagagcgtgaaactatcataatcatcacacgctcttagacaaacctttagataattta 3564

                                                                        
Query: 626  ttataaaactgattcaacgattttagcggaaaactgagggtctcgaacatatactcggng 685
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3565 ttataaaactgattcaacgattttagcggaaaactgagggtctcgaacatatactcgggg 3624

                                                                        
Query: 686  agctgatcttgtaactgtttcaattcttgtactgacctttgtttcaacaaccgtacgtaa 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3625 agctgatcttgtaactgtttcaattcttgtactgacctttgtttcaacaacggtacgtaa 3684

                                                                        
Query: 746  acaatctccgtcttatcgtccttcccctttacgaattcctacttggtatccattaatccc 805
            ||||||||||||| ||||||||||||||| |||||| |  |||||  ||||||| |||||
Sbjct: 3685 acaatctccgtctcatcgtccttccccttcacgaatcctaacttgtaatccatt-atccc 3743

                                                            
Query: 806  atccttgttccctttgactggtattaaacccaacccctagataatcct 853
            || ||||||||| ||||||||||| |||||  | |||||||| |||||
Sbjct: 3744 attcttgttccc-ttgactggtatcaaaccacagccctagatcatcct 3790


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7798
Number of Sequences: 1807
Number of extensions: 7798
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)