BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZH09FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1272 1273 0.0 >3x_Contig1272 Length = 8315 Score = 1273 bits (642), Expect = 0.0 Identities = 722/742 (97%), Gaps = 5/742 (0%) Strand = Plus / Plus Query: 85 taccaaatgtaaatgaaggtttagatgactcagccggtttttcagaggttgttgaggtac 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3487 taccaaatgtaaatgaaggtttagatgactcagccggtttttcagaggttgttgaggtac 3546 Query: 145 cgaatgtgaaagaaggctttttagcttcatcattactgttttccttgcccatagctccaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3547 cgaatgtgaaagaaggctttttagcttcatcattactgttttccttgcccatagctccaa 3606 Query: 205 atgtaaaggaaggctttgatgaatctttgttttcagttgctgtcctttgcactggagcag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3607 atgtaaaggaaggctttgatgaatctttgttttcagttgctgtcctttgcactggagcag 3666 Query: 265 agaagctaaacgatggtttagagtccgccgatggagcaggggcagagaatgtaccgaagg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3667 agaagctaaacgatggtttagagtccgccgatggagcaggggcagagaatgtaccgaagg 3726 Query: 325 tgctagctggctttgcttcttcctttttattttcactttctttggccaaatctttattgt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3727 tgctagctggctttgcttcttcctttttattttcactttctttggccaaatctttattgt 3786 Query: 385 tgctgaaagaaaatgagaacggagatgatgaattaccattatcagccttatttgacccaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3787 tgctgaaagaaaatgagaacggagatgatgaattaccattatcagccttatttgacccaa 3846 Query: 445 aggcaggaagagctggtttgcttccctcatttttctctatggatggtgcggacgcagaag 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3847 aggcaggaagagctggtttgcttccctcatttttctctatggatggtgcggacgcagaag 3906 Query: 505 gagggaatgttggtttagattgtgaagagttcccaaatatactagctggcttgttatccg 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3907 gagggaatgttggtttagattgtgaagagttcccaaatatactagctggcttgttatccg 3966 Query: 565 ttggtttttcagctggttcagattcctctgtccttgaagcatcattctttggtaaagtaa 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3967 ttggtttttcagctggttcagattcctctgtccttgaagcatcattctttggtaaagtaa 4026 Query: 625 aggcactggacgatacagtcccattaaacgttaattggggtccccttgatctctatc-tc 683 ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || Sbjct: 4027 aggcactggacgatacagtcccattaaacgtaaattggggt-cccttgatctctatcgtc 4085 Query: 684 gctgtcgctatcgctgtcaggttcctttcgcttattcccaccggaacttgaaagcggatc 743 |||||| |||||||||||||||||||| ||||||||||||||| | || || ||||||| Sbjct: 4086 gctgtc-ctatcgctgtcaggttccttacgcttattcccaccgaagctgaaaggcggatc 4144 Query: 744 agacctcctttgttttcttatccaaaacaaactttgggccttcaacattaacggcttggt 803 |||| | | ||| ||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 4145 agacgt-cgttggtttcttagccaagacaaactttgggccttcaacattaacggc-tggt 4202 Query: 804 tttttctttttagaatcactat 825 |||| || || ||||||||||| Sbjct: 4203 ttttcctcttcagaatcactat 4224 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7407 Number of Sequences: 1807 Number of extensions: 7407 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)