BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZH11FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1296 1459 0.0 >3x_Contig1296 Length = 7334 Score = 1459 bits (736), Expect = 0.0 Identities = 831/852 (97%), Gaps = 8/852 (0%) Strand = Plus / Plus Query: 87 ggaaacaaaacgctttgctaccggttactactggtaaggaattatggtttactgttttgt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1469 ggaaacaaaacgctttgctaccggttactactggtaaggaattatggtttactgttttgt 1528 Query: 147 cattaagtattaccaaacgtcaggttaaaaactgggaatatagatcaccaatgcgaaact 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1529 cattaagtattaccaaacgtcaggttaaaaactgggaatatagatcaccaatgcgaaact 1588 Query: 207 cgcattgtgatctcagctgtgaaacagaaaacaaaaggaaaagacgtggaatctcattag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1589 cgcattgtgatctcagctgtgaaacagaaaacaaaaggaaaagacgtggaatctcattag 1648 Query: 267 tacctcttcaattacgtgactggaaatagcggtgatggcattacgtcggaggtgaaaagt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1649 tacctcttcaattacgtgactggaaatagcggtgatggcattacgtcggaggtgaaaagt 1708 Query: 327 ctaatcacagtggaacaaaggtattcaaaccaggtgtaaaataaaaactggattttcttc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1709 ctaatcacagtggaacaaaggtattcaaaccaggtgtaaaataaaaactggattttcttc 1768 Query: 387 cgatatagatactaggtttccacaatgtcaagctccgatttccaatacgcaaaagcatgt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1769 cgatatagatactaggtttccacaatgtcaagctccgatttccaatacgcaaaagcatgt 1828 Query: 447 ttttcatgtgccgatcgatgcttttcctacgaacctcgatgttcgtttctcggtattttc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1829 ttttcatgtgccgatcgatgcttttcctacgaacctcgatgttcgtttctcggtattttc 1888 Query: 507 tcagttttgagtatcacagacagttactgcaccaggtggacgccggaactccgaacctga 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1889 tcagttttgagtatcacagacagttactgcaccaggtggacgccggaactccgaacctga 1948 Query: 567 gctgttgaggtccgaatagtaaataatattctcggatggtatcgagttttttgaaacaaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1949 gctgttgaggtccgaatagtaaataatattctcggatggtatcgagttttttgaaacaaa 2008 Query: 627 ttcataccacacacttcttctgcccccgttccacaattattttctcattctgtccaacta 686 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 2009 ttcataccacacac-tcttctg-ccccgttccacaatta-tttctcattctgtccaacta 2065 Query: 687 aagaataagacaggataaatatttaaatttgaaagaacgtacgtctgagttatatatttg 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2066 aagaataagacaggataaatatttaaatttgaaagaacgtacgtctgagttatatatttg 2125 Query: 747 tgttgccagtacacttccgagttgtggtacaattaaaaccattcatgtctctgggaatgt 806 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2126 tgttgccagtacacttccgagttgtggtacaattaaaaccattcatgtctctgtgaatgt 2185 Query: 807 ttgctaggtattcttgtggggagattaaactaagttttctgtgaattgtaaactatgtgc 866 |||||||||||| ||||| ||||||||||||| |||||||||| |||| || ||||||| Sbjct: 2186 ttgctaggtatttttgtgtggagattaaactaggttttctgtg-attgaaacgtatgtgc 2244 Query: 867 ttatga-tgttacaaattgttaactttccttacccaaaatttagggggatgcttggtctt 925 ||||| ||| |||||||||||||| | | |||||||||| || |||||||| ||||| | Sbjct: 2245 -tatgagtgtaacaaattgttaactatgcctacccaaaatataaggggatgc-tggtc-t 2301 Query: 926 tttcttggttct 937 |||||||||||| Sbjct: 2302 tttcttggttct 2313 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6345 Number of Sequences: 1807 Number of extensions: 6345 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)