BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZA06RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1599 1354 0.0 >3x_Contig1599 Length = 10178 Score = 1354 bits (683), Expect = 0.0 Identities = 724/735 (98%), Gaps = 2/735 (0%) Strand = Plus / Minus Query: 48 ttacccggatt-ataccggctgacgtaatgtatatcattcacgtgatcgatgattacctc 106 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2814 ttacccggattcataccggctgacgtaatgtatatcattcacgtgatcgatgattacctc 2755 Query: 107 cctgttcttcttcttgtcaccagcacttctcacccaccttcgtcccgctgccagcaaatt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2754 cctgttcttcttcttgtcaccagcacttctcacccaccttcgtcccgctgccagcaaatt 2695 Query: 167 cgagcaacctcgatatgattggtccgattagatcgaaactgacttggcccctaaactcgg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2694 cgagcaacctcgatatgattggtccgattagatcgaaactgacttggcccctaaactcgg 2635 Query: 227 agagtggggaacccaaatcctttctcttatctatacgaccgggtaacgtaatgtcacttt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2634 agagtggggaacccaaatcctttctcttatctatacgaccgggtaacgtaatgtcacttt 2575 Query: 287 gcctgcttacaccatcagcaacgcactgtagcccctcctccccttatcaatcccaagtat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2574 gcctgcttacaccatcagcaacgcactgtagcccctcctccccttatcaatcccaagtat 2515 Query: 347 gcctttttgttttttcttctgcggtgttttctgaaaaaaatacgtttgggtctgaaaact 406 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2514 gcctttttgttttttcttctgcggtgttttctgaaataaatacgtttgggtctgaaaact 2455 Query: 407 acgccattttcaagctcgaaaagagctattcaaagcacgttattcagcagtcatctttat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2454 acgccattttcaagctcgaaaagagctattcaaagcacgttattcagcagtcatctttat 2395 Query: 467 ttgactatcggttcatcccgtgaaagctggattccatctagtgcagtcccaatcccagtc 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2394 ttgactatcggttcatcccgtgaaagctggattccatctagtgcagtcccaatcccagtc 2335 Query: 527 tgagtctccgctttgttatcagaatcgattcgccaattctcattgggagaagaggagcac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 tgagtctccgctttgttatcagaatcgattcgccaattctcattgggagaagaggagcac 2275 Query: 587 agcaaatttagaaaccctcaagagatttctcgcttactcttcctttctttacttcatttt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2274 agcaaatttagaaaccctcaagagatttctcgcttactcttcctttctttacttcatttt 2215 Query: 647 tgactagtgttttcgaatgaattttttttttttggtatggtgattttatcggtatcaaat 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2214 tgactagtgttttcgaatgaattttttttttttggtatggtgattttatcggtatcaaat 2155 Query: 707 acttaatatatttcctaatattccattttatcatacaaaatgaaattttggtgcttcctt 766 |||||||||||||| ||||||| |||||||||||| |||||||||| |||| | ||| Sbjct: 2154 acttaatatatttcttaatattacattttatcataataaatgaaattaatgtgc-tactt 2096 Query: 767 actgcctgacatttt 781 ||||||||||||||| Sbjct: 2095 actgcctgacatttt 2081 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,981 Number of Sequences: 1807 Number of extensions: 13981 Number of successful extensions: 117 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)