BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZA10FM1.SCF screened BAC_end (1020 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1775 795 0.0 >3x_Contig1775 Length = 26320 Score = 795 bits (401), Expect = 0.0 Identities = 513/545 (94%), Gaps = 4/545 (0%) Strand = Plus / Minus Query: 117 ccgcagagaacaattcttacgccatcgcaacagaatcttaacaagacgtacgaagaaatt 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23931 ccgcagagaacaattcttacgccatcgcaacagaatcttaacaagacgtacgaagaaatt 23872 Query: 177 aaaggattacctatggtctttactatgggaaaagtttgataaagattttagacaagagag 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23871 aaaggattacctatggtctttactatgggaaaagtttgataaagattttagacaagagag 23812 Query: 237 actaaagaggataaatatggatgacacaatagatatagatggcgagcagtttctacaaga 296 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23811 actaaagaggaaaaacatggatgacacaatagatatagatggcgagcagtttctacaaga 23752 Query: 297 agtcgactcatatgtgcttgggtatggcagaagttttaaacaatggattattccagtcga 356 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23751 agtcgactcatatgtgcttgggtatggtagaagttttaaacaatggattattccagtcga 23692 Query: 357 cgaaagtgcgtatagttacaaagacgtggagacattagagttaccagcagacgtttgtgt 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 23691 cgaaagtgcgtatagttacaaagacgtggagacattagagttaccagcagacgtttgtat 23632 Query: 417 cacacaacaggatcttgacagtctgttcaaatttggtattccaacgaacaactatcaagt 476 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 23631 cacacaacaggatcttgacagtctgtccaaatttggtattccaacgaacaactatcaagt 23572 Query: 477 ttattctcaggatcggtatttggattgcaagagcggaaaacacggttttaactatttcaa 536 ||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||| Sbjct: 23571 cgattctcaggattggtatttggattgcaagagtggaaaacacggtattaacgatttcaa 23512 Query: 537 gattgttaaggaccaaaagatagtttgtttctgaaaaaagtcttatttgggtaacttttg 596 || || ||||||||||||||||| || || ||||||||| | ||| |||| ||| |||| Sbjct: 23511 gaaagtgaaggaccaaaagatagtatg-ttgtgaaaaaagccatatatggg-aac-tttg 23455 Query: 597 ggaggagcatgacccataacctatagccatccttttcacatggtcatgacctcttgttta 656 ||||||||| ||||||| | |||||||||| |||||||||| ||||||| | |||| | Sbjct: 23454 ggaggagcaggacccatcagtaatagccatcc-tttcacatggacatgaccacatgttaa 23396 Query: 657 caccc 661 ||||| Sbjct: 23395 caccc 23391 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7874 Number of Sequences: 1807 Number of extensions: 7874 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 1020 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1004 effective length of database: 10,329,639 effective search space: 10370957556 effective search space used: 10370957556 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)