BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC27ZB01FM1.SCF screened BAC_end
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1124 1255 0.0
3x_Contig1773 1231 0.0
3x_Contig1790 1223 0.0
3x_Contig1805 1187 0.0
3x_Contig1213 1142 0.0
>3x_Contig1124
Length = 2635
Score = 1255 bits (633), Expect = 0.0
Identities = 755/793 (95%), Gaps = 2/793 (0%)
Strand = Plus / Plus
Query: 86 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 843
Query: 146 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 903
Query: 206 tcacatggtaaatattatttactaataactctaacctcgaatttaatacccggagctttc 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 963
Query: 266 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 1023
Query: 326 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 1083
Query: 386 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 1143
Query: 446 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 1203
Query: 506 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 1263
Query: 566 tggtttttgt-aaggaaccatttacactagcttggacctccttgctttcaataaaattag 624
|||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 1264 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 1323
Query: 625 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgca-caactgttgcaaacg 683
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 1324 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 1383
Query: 684 atttccaactgtagaatgacccgttttcggagtatgcacttccattcaaaaaggtccccc 743
||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |
Sbjct: 1384 attcccaactgtagaatgacccgttttcgaagtatgcactcacattcaaaaagtacccac 1443
Query: 744 ttctgttggcggcgggtgaaataacggggaatgtatcgccggcttaaattttgtcgaaca 803
| |||||| |||||| ||| ||||||| |||||||||||| ||| || ||| |||||||
Sbjct: 1444 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 1503
Query: 804 aacggaaatttggaagggacttaccagggaataaactttccaggttgaccattgaaattg 863
|||||||||| |||| ||| || || | ||||||| ||||| | ||||||| | |||||
Sbjct: 1504 aacggaaattcggaatggaactagcaagtaataaacattccaagctgaccatcgtaattg 1563
Query: 864 ggcttttggactt 876
||| ||||||||
Sbjct: 1564 tgctattggactt 1576
>3x_Contig1773
Length = 8694
Score = 1231 bits (621), Expect = 0.0
Identities = 752/793 (94%), Gaps = 2/793 (0%)
Strand = Plus / Plus
Query: 86 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6167 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 6226
Query: 146 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6227 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 6286
Query: 206 tcacatggtaaatattatttactaataactctaacctcgaatttaatacccggagctttc 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6287 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 6346
Query: 266 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6347 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 6406
Query: 326 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 385
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 6407 cctttcttaagagagtagaaaaattgtcagataactgccaaatgctaaggccccataata 6466
Query: 386 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6467 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 6526
Query: 446 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 505
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6527 ctcgacatctcttgttactgccccggcaatgatctgttttactgcagaattgcccacagt 6586
Query: 506 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6587 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 6646
Query: 566 tggtttttgt-aaggaaccatttacactagcttggacctccttgctttcaataaaattag 624
|||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 6647 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 6706
Query: 625 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgca-caactgttgcaaacg 683
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 6707 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 6766
Query: 684 atttccaactgtagaatgacccgttttcggagtatgcacttccattcaaaaaggtccccc 743
||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |
Sbjct: 6767 attcccaactgtagaatgacccgttttcgaagtatgcactcacattcaaaaagtacccac 6826
Query: 744 ttctgttggcggcgggtgaaataacggggaatgtatcgccggcttaaattttgtcgaaca 803
| |||||| |||||| ||| ||||||| |||||||||||| ||| || ||| |||||||
Sbjct: 6827 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 6886
Query: 804 aacggaaatttggaagggacttaccagggaataaactttccaggttgaccattgaaattg 863
|||||||||| |||| ||| || || | ||||||| ||||| | ||||||| | |||||
Sbjct: 6887 aacggaaattcggaatggaactagcaagtaataaacattccaagctgaccatcgtaattg 6946
Query: 864 ggcttttggactt 876
||| ||||||||
Sbjct: 6947 tgctattggactt 6959
>3x_Contig1790
Length = 27369
Score = 1223 bits (617), Expect = 0.0
Identities = 751/793 (94%), Gaps = 2/793 (0%)
Strand = Plus / Plus
Query: 86 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 2662
Query: 146 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 2722
Query: 206 tcacatggtaaatattatttactaataactctaacctcgaatttaatacccggagctttc 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2723 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 2782
Query: 266 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 2842
Query: 326 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 2902
Query: 386 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 2962
Query: 446 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2963 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 3022
Query: 506 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3023 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 3082
Query: 566 tggtttttgt-aaggaaccatttacactagcttggacctccttgctttcaataaaattag 624
|||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 3083 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 3142
Query: 625 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgca-caactgttgcaaacg 683
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 3143 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 3202
Query: 684 atttccaactgtagaatgacccgttttcggagtatgcacttccattcaaaaaggtccccc 743
||| ||||| ||| |||||||||||||| |||| ||||| ||||||||||| ||| |
Sbjct: 3203 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 3262
Query: 744 ttctgttggcggcgggtgaaataacggggaatgtatcgccggcttaaattttgtcgaaca 803
| |||||| |||||| ||| ||||||| |||||||||||| ||| || ||| |||||||
Sbjct: 3263 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 3322
Query: 804 aacggaaatttggaagggacttaccagggaataaactttccaggttgaccattgaaattg 863
|||||||||| |||| ||| || || | ||||||| ||||| | ||||||| | |||||
Sbjct: 3323 aacggaaattcggaatggaactagcaagtaataaacattccaagctgaccatcgtaattg 3382
Query: 864 ggcttttggactt 876
||| ||||||||
Sbjct: 3383 tgctattggactt 3395
>3x_Contig1805
Length = 19369
Score = 1187 bits (599), Expect = 0.0
Identities = 703/735 (95%), Gaps = 2/735 (0%)
Strand = Plus / Minus
Query: 86 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 145
||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 19282 ataaactgaggatactttgtaccctctcccattcgatgttgataacctatacgttattga 19223
Query: 146 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19222 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 19163
Query: 206 tcacatggtaaatattatttactaataactctaacctcgaatttaatacccggagctttc 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 19162 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 19103
Query: 266 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19102 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 19043
Query: 326 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19042 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 18983
Query: 386 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18982 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 18923
Query: 446 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18922 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 18863
Query: 506 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18862 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 18803
Query: 566 tggtttttgt-aaggaaccatttacactagcttggacctccttgctttcaataaaattag 624
|||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 18802 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 18743
Query: 625 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgca-caactgttgcaaacg 683
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 18742 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 18683
Query: 684 atttccaactgtagaatgacccgttttcggagtatgcacttccattcaaaaaggtccccc 743
||| ||||| ||| |||||||||||||| |||| ||||| ||||||||||| ||| |
Sbjct: 18682 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 18623
Query: 744 ttctgttggcggcgggtgaaataacggggaatgtatcgccggcttaaattttgtcgaaca 803
| |||||| |||||| ||| ||||||| |||||||||||| ||| || ||| |||||||
Sbjct: 18622 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 18563
Query: 804 aacggaaatttggaa 818
|||||||||| ||||
Sbjct: 18562 aacggaaattcggaa 18548
>3x_Contig1213
Length = 3226
Score = 1142 bits (576), Expect = 0.0
Identities = 725/772 (93%), Gaps = 2/772 (0%)
Strand = Plus / Minus
Query: 86 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2533 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 2474
Query: 146 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2473 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 2414
Query: 206 tcacatggtaaatattatttactaataactctaacctcgaatttaatacccggagctttc 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 2354
Query: 266 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2353 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 2294
Query: 326 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2293 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 2234
Query: 386 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2233 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacgacatc 2174
Query: 446 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2173 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgctcacagt 2114
Query: 506 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 565
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2113 tgttgatcgctctttgtttcaaaccacttggagtagttactaatgtgtggggctcggcta 2054
Query: 566 tggtttttgt-aaggaaccatttacactagcttggacctccttgctttcaataaaattag 624
|||||| ||| ||||||||||||||||||||||| ||||||| | ||||||||||| ||
Sbjct: 2053 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgtattcaataaaatcag 1994
Query: 625 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgca-caactgttgcaaacg 683
||||||||||| ||| |||||||||||||| || |||||||||| |||||||||| ||||
Sbjct: 1993 ctacattaaagagttcgtgactagcgaaaaggtttgaagttgcagcaactgttgcgaacg 1934
Query: 684 atttccaactgtagaatgacccgttttcggagtatgcacttccattcaaaaaggtccccc 743
||| ||||| ||| ||||||||||||||| |||||||| | ||||||||||| ||| |
Sbjct: 1933 attcccaacggtaaaatgacccgttttcgaagtatgcagtcacattcaaaaagtacccac 1874
Query: 744 ttctgttggcggcgggtgaaataacggggaatgtatcgccggcttaaattttgtcgaaca 803
| |||||| |||||| ||| ||||||| |||||||||||| ||| || ||| |||||||
Sbjct: 1873 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 1814
Query: 804 aacggaaatttggaagggacttaccagggaataaactttccaggttgaccat 855
|||||||||| |||| ||| || || | ||||||| ||||| | |||||||
Sbjct: 1813 aacggaaattcggaatggaactagcaagcaataaacattccaagctgaccat 1762
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5956
Number of Sequences: 1807
Number of extensions: 5956
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 5
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)