BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZB03FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1414 1144 0.0 >3x_Contig1414 Length = 7923 Score = 1144 bits (577), Expect = 0.0 Identities = 657/675 (97%), Gaps = 7/675 (1%) Strand = Plus / Minus Query: 89 atatgagatattgaaggcatgcgatcttttagtgctccaggtaaagcccttctagcaggc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6994 atatgagatattgaaggcatgcgatcttttagtgctccaggtaaagcccttctagcaggc 6935 Query: 149 ggttatttagttttgaaaccagaatatggatcttatgtcgtggcgctatcgtcaagaatg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6934 ggttatttagttttgaaaccagaatatggatcttatgtcgtggcgctatcgtcaagaatg 6875 Query: 209 catgctgttgtttttta-gacgaattaattggtccatcatcgtcatcatcaataactgtt 267 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6874 catgctgttgtcaagcaagacgaattaattggtccatcatcgtcatcatcaataactgtt 6815 Query: 268 aaagtcagaagtactcagtttaatgacgacgagtggcagtataagatggattcaagctcc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6814 aaagtcagaagtactcagtttaatgacgacgagtggcagtataagatggattcaagctcc 6755 Query: 328 aattacagcccacaagaattgcaagaaaacaagaatcccttcatcgaaaaggttttatca 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6754 aattacagcccacaagaattgcaagaaaacaagaatcccttcatcgaaaaggttttatca 6695 Query: 388 acagtcttcaactactttcaacccgatttaaaactacaaggaaacatagtgatcgatatt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6694 acagtcttcaactactttcaacccgatttaaaactacaaggaaacatagtgatcgatatt 6635 Query: 448 tactcggatgctggctatcattcccaggcgggaacaaaactgagaagtaacggtgtgaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6634 tactcggatgctggctatcattcccaggcgggaacaaaactgagaagtaacggtgtgaaa 6575 Query: 508 tctttcctttttcatagtaaatctatcactgaagtccccanaactgggttggggtcttca 567 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6574 tctttcctttttcatagtaaatctatcactgaagtccccaaaactgggttggggtcttca 6515 Query: 568 gcgggattggttactgttntagtcacggcattggtttcctgcttc-aacaaaatcttgat 626 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 6514 gcgggattggttactgttttagtcacggcattggtttcctgcttcaaacaaaatcttgat 6455 Query: 627 gtttcatcaaaggatgatatgagattaattcacaatttgtctcaagtgggacatttgtca 686 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 6454 gtttcatcaaaggatgatatgagattaattcacaatttgtctcaagtggcaca-ttgtca 6396 Query: 687 ggcacaagggtaaaataggttgtggcttttgatgttgctgcagcagggtaccggaacctt 746 ||||||| |||||||||||| ||||| ||||||||||||||||||| ||| ||||||| | Sbjct: 6395 ggcacaa-ggtaaaataggtagtggc-tttgatgttgctgcagcagtgta-cggaaccat 6339 Query: 747 cactttacaacagat 761 ||| ||||||||||| Sbjct: 6338 cac-ttacaacagat 6325 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6424 Number of Sequences: 1807 Number of extensions: 6424 Number of successful extensions: 81 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)