BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZB07FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1768 952 0.0 >3x_Contig1768 Length = 25668 Score = 952 bits (480), Expect = 0.0 Identities = 525/535 (98%), Gaps = 5/535 (0%) Strand = Plus / Minus Query: 87 tcagtaccagaagttcaagatgacgacaaaaatagcaaggtgcgcaacaggaaacatcag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23464 tcagtaccagaagttcaagatgacgacaaaaatagcaaggtgcgcaacaggaaacatcag 23405 Query: 147 cgatttgatttagaagagaagaagaaaaagctgaggctgcagaagactatagaagaacaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23404 cgatttgatttagaagagaagaagaaaaagctgaggctgcagaagactatagaagaacaa 23345 Query: 207 ataaaacatcatgatattgaaatgacagctaatagagtcgtgaatgttgaccatgttgtc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23344 ataaaacatcatgatattgaaatgacagctaatagagtcgtgaatgttgaccatgttgtc 23285 Query: 267 aggcaacattataatgagcgtacgtttctttccaaaaagcataacagaaattattctcct 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23284 aggcaacattataatgagcgtacgtttctttccaaaaagcataacagaaattattctcct 23225 Query: 327 atcattaaacttagaaactttaataatgctatcaagtacattctcattgacaagtttaca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23224 atcattaaacttagaaactttaataatgctatcaagtacattctcattgacaagtttaca 23165 Query: 387 agagcaggagatgtagtcttggagcttgcctgtggtaaaggtggtgatttaaggaaatat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23164 agagcaggagatgtagtcttggagcttgcctgtggtaaaggtggtgatttaaggaaatat 23105 Query: 447 ggtgccgcaggaatatcacagtttattggtattgacatttccaatgcttaatttaccgag 506 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 23104 ggtgccgcaggaatatcacagtttattggtattgacatttccaatgcttcaattaccgag 23045 Query: 507 gcgcttaaacgttatcattcgatgaagaaccttgaataccaagttattctaattactggg 566 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23044 gcgcttaaacgttatcattcgatgaagaaccttgaataccaagttattctaattactggt 22985 Query: 567 gatttgttttggtgaggccccttgggggtcgcaagttgaatcatttcccagaatg 621 || ||||||||||||| ||| | |||||||| |||||||||| ||||||||||| Sbjct: 22984 ga-ttgttttggtgagtccc--ttggggtcgc-agttgaatca-ttcccagaatg 22935 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8726 Number of Sequences: 1807 Number of extensions: 8726 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)