BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC27ZB07FM1.SCF screened BAC_end
         (937 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1768                                                         952   0.0  

>3x_Contig1768 
          Length = 25668

 Score =  952 bits (480), Expect = 0.0
 Identities = 525/535 (98%), Gaps = 5/535 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    tcagtaccagaagttcaagatgacgacaaaaatagcaaggtgcgcaacaggaaacatcag 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23464 tcagtaccagaagttcaagatgacgacaaaaatagcaaggtgcgcaacaggaaacatcag 23405

                                                                         
Query: 147   cgatttgatttagaagagaagaagaaaaagctgaggctgcagaagactatagaagaacaa 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23404 cgatttgatttagaagagaagaagaaaaagctgaggctgcagaagactatagaagaacaa 23345

                                                                         
Query: 207   ataaaacatcatgatattgaaatgacagctaatagagtcgtgaatgttgaccatgttgtc 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23344 ataaaacatcatgatattgaaatgacagctaatagagtcgtgaatgttgaccatgttgtc 23285

                                                                         
Query: 267   aggcaacattataatgagcgtacgtttctttccaaaaagcataacagaaattattctcct 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23284 aggcaacattataatgagcgtacgtttctttccaaaaagcataacagaaattattctcct 23225

                                                                         
Query: 327   atcattaaacttagaaactttaataatgctatcaagtacattctcattgacaagtttaca 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23224 atcattaaacttagaaactttaataatgctatcaagtacattctcattgacaagtttaca 23165

                                                                         
Query: 387   agagcaggagatgtagtcttggagcttgcctgtggtaaaggtggtgatttaaggaaatat 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23164 agagcaggagatgtagtcttggagcttgcctgtggtaaaggtggtgatttaaggaaatat 23105

                                                                         
Query: 447   ggtgccgcaggaatatcacagtttattggtattgacatttccaatgcttaatttaccgag 506
             ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 23104 ggtgccgcaggaatatcacagtttattggtattgacatttccaatgcttcaattaccgag 23045

                                                                         
Query: 507   gcgcttaaacgttatcattcgatgaagaaccttgaataccaagttattctaattactggg 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 23044 gcgcttaaacgttatcattcgatgaagaaccttgaataccaagttattctaattactggt 22985

                                                                    
Query: 567   gatttgttttggtgaggccccttgggggtcgcaagttgaatcatttcccagaatg 621
             || ||||||||||||| |||  | |||||||| |||||||||| |||||||||||
Sbjct: 22984 ga-ttgttttggtgagtccc--ttggggtcgc-agttgaatca-ttcccagaatg 22935


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8726
Number of Sequences: 1807
Number of extensions: 8726
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)