BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZB09FM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig911 1324 0.0 >3x_Contig911 Length = 4722 Score = 1324 bits (668), Expect = 0.0 Identities = 715/728 (98%), Gaps = 2/728 (0%) Strand = Plus / Plus Query: 88 aagtcggttgcttgtgataacgtgcggtacatcccaggggaaagatgagatattccagta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 aagtcggttgcttgtgataacgtgcggtacatcccaggggaaagatgagatattccagta 1202 Query: 148 tatcccaataatgaactgtatattctcggcaaccaaaatgaaatgttccatcgatgtggt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1203 tatcccaataatgaactgtatattctcggcaaccaaaatgaaatgttccatcgatgtggt 1262 Query: 208 taagattggtgggggtatagaaagcactttcttgcaacaagcaactgatgccactagtgg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1263 taagattggtgggggtatagaaagcactttcttgcaacaagcaactgatgccactagtgg 1322 Query: 268 ggtgtacttacatgtagaaaacacaagaggtttaattcaatatttatcaacggccatgtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1323 ggtgtacttacatgtagaaaacacaagaggtttaattcaatatttatcaacggccatgtt 1382 Query: 328 tatagatccgtctttgagaaatgtgataattaaaccaaatcaagggtctgtcgattttag 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1383 tatagatccgtctttgagaaatgtgataattaaaccaaatcaagggtctgtcgattttag 1442 Query: 388 aacttcatgttttctaacgggtaaagtggtcgctgtcggatttgtgtgtagtgtttgctt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1443 aacttcatgttttctaacgggtaaagtggtcgctgtcggatttgtgtgtagtgtttgctt 1502 Query: 448 atgtgtgctttcagtgatacctccaggtcagaaatgtcctgcttgtgactcgccgtttga 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1503 atgtgtgctttcagtgatacctccaggtcagaaatgtcctgcttgtgactcgccgtttga 1562 Query: 508 cagtaagattatcgccagactcagaagaaagcctgtattgagcaatggtgtaccgaagaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1563 cagtaagattatcgccagactcagaagaaagcctgtattgagcaatggtgtaccgaagaa 1622 Query: 568 gaaaaatgttagtaataaatagcatcggggttttccatacctatttaaagtacatatata 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1623 gaaaaatgttagtaataaatagcatcggggttttccatacctatttaaagtacatatata 1682 Query: 628 atcactgtcagcaaccactatttaaaatatcaaagtcaaactgatcactatagtaatggt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 atcactgtcagcaaccactatttaaaatatcaaagtcaaactgatcactatagtaatggt 1742 Query: 688 gtctcttttaatgatcgattctctcgtttgaatttgaaaac-tcatcgaacaatctttgt 746 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 1743 gtctctttaaatgatcgattctctcgtttgaatttgaaaacgtcatcgaacaatcttgtt 1802 Query: 747 tcaggcctctttagcctgtaattaccgttcttgaaccgaatatgaaattttttgatttgt 806 ||||| || |||||||||||||||||||||||||| || ||||||||| || ||| ||| Sbjct: 1803 ccaggcatc-ttagcctgtaattaccgttcttgaacggattatgaaattcttcgatatgt 1861 Query: 807 atttccat 814 | |||||| Sbjct: 1862 aattccat 1869 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6666 Number of Sequences: 1807 Number of extensions: 6666 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)