BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZB11RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1049 1168 0.0 >3x_Contig1049 Length = 4107 Score = 1168 bits (589), Expect = 0.0 Identities = 624/633 (98%), Gaps = 2/633 (0%) Strand = Plus / Plus Query: 47 cgccagcacctcaattaatgttggtacactggttgcaatgaaaaacttaccctttattct 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2934 cgccagcacctcaattaatgttggtacactggttgcaatgaaaaacttaccctttattct 2993 Query: 107 atcagtaatttgattccaaatctcaaactcactagtagaaatatcgccatatctatcaga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2994 atcagtaatttgattccaaatctcaaactcactagtagaaatatcgccatatctatcaga 3053 Query: 167 atgaaccattgaaagataaccaactgttaaagcactcaatgccaggtcccagacgaggct 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3054 atgaaccattgaaagataaccaactgttaaagcactcaatgccaggtcccagacgaggct 3113 Query: 227 atcttcatatggtagcgaatcacctttgataaatgactggtaatcatgtttgatataggc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3114 atcttcatatggtagcgaatcacctttgataaatgactggtaatcatgtttgatataggc 3173 Query: 287 tttaaatctgccttttcgaactgggtttgtactcatcgttaatctctgaccaggattgat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3174 tttaaatctgccttttcgaactgggtttgtactcatcgttaatctctgaccaggattgat 3233 Query: 347 ctctacctagcaacaggatcccgtgaagtacactaaagattgatattgtttctagccaat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3234 ctctacctagcaacaggatcccgtgaagtacactaaagattgatattgtttctagccaat 3293 Query: 407 gaaaacaagcttgtttggatcgaatgtggtaagcatcagttcactttccaacgttaatcg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3294 gaaaacaagcttgtttggatcgaatgtggtaagcatcagttcactttccaacgttaatcg 3353 Query: 467 aggttcctttatttttgtatctaaggtggtcatatgaatctattattagttgaaatattt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3354 aggttcctttatttttgtatctaaggtggtcatatgaatctattattagttgaaatattt 3413 Query: 527 caaagtcagttcaaatgactgtcacgtgagagaaagatctattttagtttcgcagcacga 586 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3414 caaagtcagttcaaatgactgtcacgtgagagaatgatctattttagtttcgcagcacga 3473 Query: 587 tggatgccaccgtgaaccttcacgcatacacttgaagcaacttgggaagtttataagcca 646 ||||||||||||||||||| |||||||||||| ||||||| | ||||||| |||||||| Sbjct: 3474 tggatgccaccgtgaacctccacgcatacactgaaagcaac-tcggaagttaataagcca 3532 Query: 647 ctatcggatccaatatattcatcaacaggtttg 679 ||||| ||||||||| ||||||||||||||||| Sbjct: 3533 ctatc-gatccaatagattcatcaacaggtttg 3564 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7777 Number of Sequences: 1807 Number of extensions: 7777 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)