BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZC02RM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1340 1104 0.0 >3x_Contig1340 Length = 7156 Score = 1104 bits (557), Expect = 0.0 Identities = 578/584 (98%), Gaps = 1/584 (0%) Strand = Plus / Minus Query: 46 gctttaccttggaatgctgaatgtcatctgtactgaattgtgccggcttgtaattttttg 105 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 584 gctttaccttggaatgctgaagggcatctgtactgaattgtgccggcttgtaattttttg 525 Query: 106 gaagcgaggtacattcatcacgaggatcatcatccatttccataccatcaggcacatacc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 gaagcgaggtacattcatcacgaggatcatcatccatttccataccatcaggcacatacc 465 Query: 166 ttaaatcatagacattggctgtagattcatattctgtgccatcacagttttga-atantg 224 |||||||| |||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct: 464 ttaaatcaaagacattggctgtagattcatattctgtgccatcacagttttgatagattg 405 Query: 225 attcggctgtcctaatgtcgctgcagtaaaccacggcataatagtatcttagacgttcca 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 attcggctgtcctaatgtcgctgcagtaaaccacggcataatagtatcttagacgttcca 345 Query: 285 attggtaacgacgaagtgctttagaatcatagtcctctgcgtctccttcctcataaattg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 attggtaacgacgaagtgctttagaatcatagtcctctgcgtctccttcctcataaattg 285 Query: 345 attcgacattaatctcatcatcatctttatcattcttcttggatttctttgactggaata 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 attcgacattaatctcatcatcatctttatcattcttcttggatttctttgactggaata 225 Query: 405 attcttttggaggaccttcgatctcttcacgttgcatcctttctttaccaaattcacttg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 attcttttggaggaccttcgatctcttcacgttgcatcctttctttaccaaattcacttg 165 Query: 465 gatatatggcaattttttgaatctctcctcccttaggcacgaaagacttaaatgtgacaa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gatatatggcaattttttgaatctctcctcccttaggcacgaaagacttaaatgtgacaa 105 Query: 525 acaaatcagcagatttgacatgatcccaatccaggttcactacagccaacgtatttgtgg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 acaaatcagcagatttgacatgatcccaatccaggttcactacagccaacgtatttgtgg 45 Query: 585 catttccactagcaggtttggactcttctagttcgatttcttct 628 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 catttccactagcaggtttggactcttctagttcgatttcttct 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7678 Number of Sequences: 1807 Number of extensions: 7678 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)