BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZC05FM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1648 1378 0.0 >3x_Contig1648 Length = 16375 Score = 1378 bits (695), Expect = 0.0 Identities = 762/779 (97%), Gaps = 4/779 (0%) Strand = Plus / Plus Query: 86 tgactaagggcccagagaacacagaagaattaactaatgaagctaatgaattcaagattt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8600 tgactaagggcccagagaacacagaagaattaactaatgaagctaatgaattcaagattt 8659 Query: 146 tttggggtaaaaaagcatctcttcgtagattcaaggacggttccattgcaaactgctgtg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8660 tttggggtaaaaaagcatctcttcgtagattcaaggacggttccattgcaaactgctgtg 8719 Query: 206 tctggtcaacttctgctattgaaagtgttgtttcttcgattttgtcctatgttctaaggc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8720 tctggtcaacttctgctattgaaagtgttgtttcttcgattttgtcctatgttctaaggc 8779 Query: 266 tacatttgactgaagactgcaaactcatcaataattccactagccaattccaacagttgt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8780 tacatttgactgaagactgcaaactcatcaataattccactagccaattccaacagttgt 8839 Query: 326 taccactaccgaacctacctgcatcttcaaagacatcagttctaaacctatcaagctact 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8840 taccactaccgaacctacctgcatcttcaaagacatcagttctaaacctatcaagctact 8899 Query: 386 ataacttgaagaagtcctttgacgatttgtataaaatcatgttcgagctaaaactcccat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8900 ataacttgaagaagtcctttgacgatttgtataaaatcatgttcgagctaaaactcccat 8959 Query: 446 tatcaattaaatctcttttacctattggttctgcattcaggtacacatcattatgtcagc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8960 tatcaattaaatctcttttacctattggttctgcattcaggtacacatcattatgtcagc 9019 Query: 506 ctgtcccatacgcatattctaatcctgatttcttacaagacgttgttatcgaattcgaaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9020 ctgtcccatacgcatattctaatcctgatttcttacaagacgttgttatcgaattcgaaa 9079 Query: 566 cgtctacaaaatggcctgacgaaattacttcgttggaaaaggctaaagctgcatttttat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9080 cgtctacaaaatggcctgacgaaattacttcgttggaaaaggctaaagctgcatttttat 9139 Query: 626 tgaagattcaag-atccatcacgcagacttatagtgagtacaagtgctactttacacgtg 684 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9140 tgaagattcaagaatccatcacgcagactcatagtgagtacaagtgctactttacacgtg 9199 Query: 685 atgaatcgatttcatacaacttggaaatagttactctaaacattttgactccag-aggat 743 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9200 atgaatcgattccatacaacttggaaatagttactctaaacattttgactccagaaggat 9259 Query: 744 accgtttccaagtttagagttctaactgagagagacaaagttttgttttttgaaagcaat 803 || |||| |||||||||||||||||||||||||||| ||||| || | ||||| |||||| Sbjct: 9260 acggttt-caagtttagagttctaactgagagagacgaagttatg-tatttgagagcaat 9317 Query: 804 taacaacgccagaaaagaacttagacccgtgctggaaaagaacttcttgaaatttactg 862 ||||||||| ||||||||||| ||||| | ||||||||||| |||||||||||||||| Sbjct: 9318 taacaacgcaagaaaagaactaagaccagagctggaaaagacattcttgaaatttactg 9376 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6815 Number of Sequences: 1807 Number of extensions: 6815 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)