BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZC05RM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig837 1203 0.0 >3x_Contig837 Length = 3290 Score = 1203 bits (607), Expect = 0.0 Identities = 668/679 (98%), Gaps = 7/679 (1%) Strand = Plus / Minus Query: 48 ttatttagtagcggcactgaaatacgttctcttccatcttcactggaaggcagtttccaa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1916 ttatttagtagcggcactgaaatacgttctcttccatcttcactggaaggcagtttccaa 1857 Query: 108 gtgaaaattaccattctcatccttggcgaacactcctttctcagttataataccatcgat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1856 gtgaaaattaccattctcatccttggcgaacactcctttctcagttataataccatcgat 1797 Query: 168 gtgagtatatggagtgatatcaaatgatggattccatactggcatatctaaaggtgtaat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1796 gtgagtatatggagtgatatcaaatgatggattccatactggcatatctaaaggtgtaat 1737 Query: 228 tccaactttggccttcacgggagtcttggattcgttcaataccggagttgggtcagttcc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 tccaactttggccttcacgggagtcttggattcgttcaataccggagttgggtcagttcc 1677 Query: 288 gtcgattagagtaccttgaacaaatctgaactcatttggaggtctttcctcaaccactat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1676 gtcgattagagtaccttgaacaaatctgaactcatttggaggtctttcctcaaccactat 1617 Query: 348 cttgtccccagtttctgtattgctatcaaaagtagtagttggtgcgacaacgtaaaactt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 cttgtccccagtttctgtattgctatcaaaagtagtagttggtgcgacaacgtaaaactt 1557 Query: 408 gatcccaaagtgtctacagacgattgacaattggtaagtaccaatcttattggccgtgtc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1556 gatcccaaagtgtctacagacgattgacaattggtaagtaccaatcttattggccgtgtc 1497 Query: 468 accattcttaactattctatcagcaccaacgaatgcagctttgataggtatctttgatgt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 accattcttaactattctatcagcaccaacgaatgcagctttgataggtatctttgatgt 1437 Query: 528 ggatactaggtatgaaatggatgagtctgtaatcaacgtggatggaatttcatcatgtaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1436 ggatactaggtatgaaatggatgagtctgtaatcaacgtggatggaatttcatcatgtaa 1377 Query: 588 catttcgtatgcagttaagcgggatcccttggtttgaaggacgtgtttccaatgggaata 647 || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 1376 caattcgtatgcagttaagcgggatccc-tggttgtaaggacgtgtttccaatgggaata 1318 Query: 648 cacgaaccatttttggcatttccaagtctttcgtcctcttttggttgttcatccccgctt 707 ||||||||| |||||||| ||| ||||| ||||||||| ||||||||||||||||||| | Sbjct: 1317 cacgaacca-ttttggca-ttcgaagtc-ttcgtcctc-tttggttgttcatccccgc-t 1263 Query: 708 gatttgctttctttgttct 726 ||||||| ||||||||||| Sbjct: 1262 gatttgc-ttctttgttct 1245 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8724 Number of Sequences: 1807 Number of extensions: 8724 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)