BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZC09RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1741 1227 0.0 >3x_Contig1741 Length = 21706 Score = 1227 bits (619), Expect = 0.0 Identities = 700/718 (97%), Gaps = 7/718 (0%) Strand = Plus / Plus Query: 49 aacaattctaatttggccctctttcaaagcaatgatagagacaatcaactcgacagcatt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3129 aacaattctaatttggccctctttcaaagcaatgatagagacaatcaactcgacagcatt 3188 Query: 109 acctagagttgcattcaacaacccacctaaggtactaccggccttttcagaaagctgttc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3189 acctagagttgcattcaacaacccacctaaggtactaccggccttttcagaaagctgttc 3248 Query: 169 agttgcaaaggctaggattgctgctaatgggataatggccatgaaattgaatacgaaaac 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3249 agttgcaaaggctaggattgctgctaatgggataatggccatgaaattgaatacgaaaac 3308 Query: 229 ccaggtggtagataactgtccatatccgaagattaatcctagcggaacaaaaacgagcaa 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3309 ccaggtggtagataactgtccatatccgaagattaatcctagcggaacaaaaacgagcaa 3368 Query: 289 atagtttaccggagacgaatggaacactactttggaaacttcaatacatcttaccaacgc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3369 atagtttaccggagacgaatggaacactactttggaaacttcaatacatcttaccaacgc 3428 Query: 349 agaagaggatctgcggatacc-ggctccagtagatgacaataaaggtgcagacgaatcca 407 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3429 agaagaggatctgcggataccgggctccagtagatgacaataaaggtgcagacgaatcca 3488 Query: 408 tggtattttgagttaattgttcagaaatatagacaccagactgtctctcagaaagtaatc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3489 tggtattttgagttaattgttcagaaatatagacaccagactgtctctcagaaagtaatc 3548 Query: 468 agggttcaccttgtttttaacggttcgatcaaaaaagaatttaactccagttgctcggct 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3549 agggttcaccttgtttttaacggttcgatcaaaaaagaatttaactccagttgctcggct 3608 Query: 528 aaaatcagagaaatgtcaggcaactttaccaaagtctaaagctgaacttaggatgagaag 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3609 aaaatcagagaaatgtcaggcaactttaccaaagtctaaagctgaacttaggatgagaag 3668 Query: 588 ctgtgtaatgaatttaatcctttctaaacagcgcaaacttcagacctttgagagacatga 647 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 3669 ctgtgtaatgaatttaatccttctaaaacagcgcaaacttcagaccttgaagagacatga 3728 Query: 648 tatttnttatctttttcatgcaattaattatacttttttagaaaaaacattagccattat 707 ||||| ||||||||||||||||||||||||||| ||||||| |||||||| || || || Sbjct: 3729 tattttttatctttttcatgcaattaattatac-tttttaggaaaaacataag-caatag 3786 Query: 708 tgcagaaaatgcccaaggcttcaaggcctttttcctgaggtacccaaattgaaacttt 765 ||||||||||| ||||||| |||||||| | ||||||||||| ||||||||||||||| Sbjct: 3787 tgcagaaaatg-ccaaggc-tcaaggcc-tcttcctgaggta-ccaaattgaaacttt 3840 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6803 Number of Sequences: 1807 Number of extensions: 6803 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)