BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZD01FM1.SCF screened BAC_end (1029 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1359 349 7e-96 >3x_Contig1359 Length = 7536 Score = 349 bits (176), Expect = 7e-96 Identities = 176/176 (100%) Strand = Plus / Minus Query: 87 taattgtgaaaagaaagtacggcaaatccttcattgcctgaatggataaccaaaataaat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7293 taattgtgaaaagaaagtacggcaaatccttcattgcctgaatggataaccaaaataaat 7234 Query: 147 atcattgggccttatgatcgttcaatatcattgatctattatttagaagaaagagacaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7233 atcattgggccttatgatcgttcaatatcattgatctattatttagaagaaagagacaaa 7174 Query: 207 attacgaaaatatgtaaaacggatatggcgtgaagtaggctataacagccaacagg 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7173 attacgaaaatatgtaaaacggatatggcgtgaagtaggctataacagccaacagg 7118 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 39,349 Number of Sequences: 1807 Number of extensions: 39349 Number of successful extensions: 2335 Number of sequences better than 1.0e-20: 1 length of query: 1029 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1013 effective length of database: 10,329,639 effective search space: 10463924307 effective search space used: 10463924307 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)