BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZD03FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1676 920 0.0 >3x_Contig1676 Length = 15800 Score = 920 bits (464), Expect = 0.0 Identities = 482/488 (98%) Strand = Plus / Plus Query: 107 aaaacaaaggtctcacctttccgtataacaagctcatgtgcgtcacggcagatcacttat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12435 aaaacaaaggtctcacctttccgtataacaagctcatgtgcgtcacggcagatcacttat 12494 Query: 167 ctatcggatccaaagctaaatatggcaaatcctctgcactattaaccgtcacttttgcat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12495 ctatcggatccaaagctaaatatggcaaatcctctgcactattaaccgtcacttttgcat 12554 Query: 227 cagtcatgttttgttttcattgaaaagaaactgaaaaattaatgatttctcgttgtatag 286 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12555 cagtcaggttatgttttcattgaaaagaaactgaaaaattaatgatttctcgttgtatag 12614 Query: 287 caaaataaataggattttgcgaccagccaattttgtatattaacaggagttaccttgaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12615 caaaataaataggattttgcgaccagccaattttgtatattaacaggagttaccttgaga 12674 Query: 347 tgcctttttaccattggctagccatcaattcatcccaaacgtagtagttccacctacatg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12675 tgcctttttaccattggctagccatcaattcatcccaaacgtagtagttccacctacatg 12734 Query: 407 ttcaaggaaagattactcaacatcctcaagcatatacgaccaatgagtaccgaaactact 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12735 ttcaaggaaagattactcaacatcctcaagcatatacgaccaatgagtaccgaaactact 12794 Query: 467 gccaaatattatccaaaaattgttgagtctgcgcaagcggaccagatcttaaagctaaac 526 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12795 gccaaatattatccaaaaattgttgagtctgcgcaagcggaccagagcttaaagctaaac 12854 Query: 527 cacacatgtttcaaggtaaaggatccaaaggttactgttgcgttctaccaggaacaattt 586 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12855 cacacatgtttcagggtaaaggatccaaaggtcactgttgcgttctaccaggaacaattt 12914 Query: 587 ggtttgaa 594 ||| |||| Sbjct: 12915 ggtatgaa 12922 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8484 Number of Sequences: 1807 Number of extensions: 8484 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)