BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZD06RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1753 1267 0.0 >3x_Contig1753 Length = 23959 Score = 1267 bits (639), Expect = 0.0 Identities = 710/731 (97%), Gaps = 2/731 (0%) Strand = Plus / Minus Query: 48 caatttttgggttcatctatatgaatcgattcatcgtttattttaattgtattcttttta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19639 caatttttgggttcatctatatgaatcgattcatcgtttattttaattgtattcttttta 19580 Query: 108 taagagtgtcaagtaaaaaaaagtgaaggagattagaaacacttcaagtgaacgatggat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19579 taagagtgtcaagtaaaaaaaagtgaaggagattagaaacacttcaagtgaacgatggat 19520 Query: 168 ggaccagattcgtcgtattcttgctttgagatccacatttgttggaaagtggtctaagag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19519 ggaccagattcgtcgtattcttgctttgagatccacatttgttggaaagtggtcaaagag 19460 Query: 228 gccaaaatagaaccaccgatccagacagagtactttctttctggaggagcgatgatcttg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19459 gccaaaatagaaccaccgatccagacagagtactttctttctggaggagcgatgatcttg 19400 Query: 288 accttcatagaagaaggagccaaggcggtaatttccttttgcattctttcagcaatacct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19399 accttcatagaagaaggagccaaggcggtaatttccttttgcattctttcagcaatacct 19340 Query: 348 gggaacatggtggtaccaccggacatgacgatgttaccgtacaattcctttctgacatca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19339 gggaacatggtggtaccaccggacatgacgatgttaccgtacaattcctttctgacatca 19280 Query: 408 acatcacacttcatgatggagttgtaagtagtttggtcgataccagcagcttccaaactt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19279 acatcacacttcatgatggagttgtaagtagtttggtcgataccagcagcttccaaactt 19220 Query: 468 agaacagatggatggaacaaagcttctggagctctgaatctttcgttaccgatagtgata 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19219 agaacagatggatggaacaaagcttctggagctctgaatctttcgttaccgatagtgata 19160 Query: 528 acttggccatctggtaattcgttagacttttcaacagcggatgattgagaagcagtttgc 587 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 19159 acttggccatctggtaattcgtaagacttttcaacagcggatgattgagaagcagtttgc 19100 Query: 588 atttcttgttcgaagtccaaagcgacgtaacatagctttttcttgatgtcacggacgatt 647 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 19099 atttcttgttcgaagtccaaagcgacgtaacatagcttttccttgatgtcacggacgatt 19040 Query: 648 tctcttttagcggtggtagagaaagaagtaccacgttcagccaagatctttattaagtag 707 ||||||| |||||| ||||||||||| ||||||||||||||||||||| || |||||| Sbjct: 19039 tctctttcagcggtagtagagaaagagtaaccacgttcagccaagatcttcatcaagtag 18980 Query: 708 tcggtgattttttttaccatcc-agtcgattttcaagaatgcgtgaggcatgtagaaacc 766 ||||||| | | | ||||| || |||||||| |||||| |||||||||| | ||||||| Sbjct: 18979 tcggtga-tatctctaccagccaagtcgattctcaagatagcgtgaggcaaggagaaacc 18921 Query: 767 ggcgtagattg 777 ||||||||||| Sbjct: 18920 ggcgtagattg 18910 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,062 Number of Sequences: 1807 Number of extensions: 12062 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)