BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZE02RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1541 1223 0.0 >3x_Contig1541 Length = 10565 Score = 1223 bits (617), Expect = 0.0 Identities = 693/709 (97%), Gaps = 7/709 (0%) Strand = Plus / Plus Query: 47 gcttagccatttccatattaagctcgtcgttactcctataaaacacatcttcgatttcct 106 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7211 gcttagccatttccatattaagccagtcgttactcctataaaacacatcttcgatttcct 7270 Query: 107 tatgccctttcagcatgacatcattgaactcattgagtgattcc-caatagatcgcgaac 165 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 7271 tatgccctttcagcatgacatcattgaactcattgagtgattccacaatagatcgcgaac 7330 Query: 166 cacccgtttggttcttgagcttctttttggcagcctttaaagcccaatccattttttata 225 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 7331 cacccgtttggttcttgagcttctttttggcagcctttaaagcccaatccatcgttta-a 7389 Query: 226 attcaaagccaccacgggagctatccatgtaaagctgtgaatttctgagctgggtagaaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7390 attcaaagccaccacgggagctatccatgtaaagctgtgaatttctgagctgggtagaaa 7449 Query: 286 ttggtcgagtctttacccacaaatatagaagtactggggataaaagcgtctaaacttttt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7450 ttggtcgagtctttacccacaaatatagaagtactggggataaaagcgtctaaacttttt 7509 Query: 346 tgttattattttggttttgattcattatataaaacgacttcaattatacaaaccaaaaca 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7510 tgttattattttggttttgattcattatataaaacgacttcaattatacaaaccaaaaca 7569 Query: 406 acgcaagttttgtcagagtacatgttgctgtgcttgataccgattgacctacaccgatat 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7570 acgcaagttttgtcagagtacatgttgctgtgcttgataccgattgacctacaccgatat 7629 Query: 466 tttggttcggtaactaatcaaacatgaggatcaaccagttaggataaagaaagtttgata 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7630 tttggttcggtaactaatcaaacatgaggatcaaccagttaggataaagaaagtttgata 7689 Query: 526 ctatccacgtgaatatcacgtggatcatacggaaagagattaaacctattttgacaatgg 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7690 ctatccacgtgaatatcacgtggatcatacggaaagagattaaacctattttgacaatgg 7749 Query: 586 taagaatttgaatacttcaagatatgatgaaagcatgatatttatgtaggaaagtttact 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7750 taagaatttgaatacttcaagatatgatgaaagcatgatatttatgtaggaaagtttact 7809 Query: 646 cagaagtgatttgaaactgtttattatgacaacagttttccgatttcaaattttcctgag 705 |||||||||||||||||||||||| | |||||||| ||||||| |||||| | | ||||| Sbjct: 7810 cagaagtgatttgaaactgtttatcaggacaacag-tttccga-ttcaaaatatactgag 7867 Query: 706 agattatttcaacaatttgcttgttttgatgacttgcctgaactctttt 754 ||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 7868 agattatttcaacaa-ttgcttg-tttgatgac-tgcctgaactctttt 7913 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8802 Number of Sequences: 1807 Number of extensions: 8802 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)