BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC27ZE05FM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1410                                                        1344   0.0  

>3x_Contig1410 
          Length = 7640

 Score = 1344 bits (678), Expect = 0.0
 Identities = 725/733 (98%), Gaps = 6/733 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   ctgaaactgcaattcccggatgctaaaccgtattacgctgacccgtcaggaacattggat 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6526 ctgaaactgcaattcccggatgctaaaccgtattacgctgacccgtcaggaacattggat 6585

                                                                        
Query: 146  atacacggtaaggcaaagcaagcagactccgccgtttacatcgaatgtaatgtctgtgga 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6586 atacacggtaaggcaaagcaagcagactccgccgtttacatcgaatgtaatgtctgtgga 6645

                                                                        
Query: 206  cgggaagttagtgggaacaggttcgctgctcatctcgttagatgcttatcacgtggtaga 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6646 cgggaagttagtgggaacaggttcgctgctcatctcgttagatgcttatcacgtggtaga 6705

                                                                        
Query: 266  aggtgagatttcattacccagccttagtgcagccttaaatcttcccccaaacccataatg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6706 aggtgagatttcattacccagccttagtgcagccttaaatcttcccccaaacccataatg 6765

                                                                        
Query: 326  tgtgtcatttcaaatcaagttgtccagcatcgtaccctgtacccttaaacctgtgataac 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6766 tgtgtcatttcaaatcaagttgtccagcatcgtaccctgtacccttaaacctgtgataac 6825

                                                                        
Query: 386  gatctttaacccatcattataacggtgtaaagagttgtcaggtgttactctacagaagag 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6826 gatctttaacccatcattataacggtgtaaagagttgtcaggtgttactctacagaagag 6885

                                                                        
Query: 446  cggaaagttagagacactagaactagcaagtacccttcagagaattaaactgagttactt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6886 cggaaagttagagacactagaactagcaagtacccttcagagaattaaactgagttactt 6945

                                                                        
Query: 506  atgtcgactttgctagagactttagatcaacaatgggtcaattccagattatacgttgat 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6946 atgtcgactttgctagagactttagatcaacaatgggtcaattccagattatacgttgat 7005

                                                                        
Query: 566  aaagacgagcgcaggacccagcttgggaaatgtgttgaagaagtgcacgactttaagatc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7006 aaagacgagcgcaggacccagcttgggaaatgtgttgaagaagtgcacgactttaagatc 7065

                                                                        
Query: 626  cagttgaagaaattgaaagcgcatttgctgaagcatggatcaagtccacagaaacgtctt 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7066 cagttgaagaaattgaaagcgcatttgctgaagcatggatcaagtccacagaaacgtctt 7125

                                                                        
Query: 686  gttattagggagaaactagcgaaatctcataagaactgggatttctttcatgaagaaatc 745
            ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 7126 gttattagggagaaactagcgaaatctcataagaactggga-ttcttccatgaagaaatc 7184

                                                                        
Query: 746  ctttaaactcttctatcagcacttaccgggaagtnttcaaaggcggtgcgtcaaagccct 805
            | ||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||
Sbjct: 7185 c-ttaaactcttctatcagcacttacc-ggaagttttcaaaggc-gtgcgtc-aagccct 7240

                         
Query: 806  tgaaatgagtttc 818
            || ||||||||||
Sbjct: 7241 tg-aatgagtttc 7252


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6101
Number of Sequences: 1807
Number of extensions: 6101
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)