BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZE05FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1410 1344 0.0 >3x_Contig1410 Length = 7640 Score = 1344 bits (678), Expect = 0.0 Identities = 725/733 (98%), Gaps = 6/733 (0%) Strand = Plus / Plus Query: 86 ctgaaactgcaattcccggatgctaaaccgtattacgctgacccgtcaggaacattggat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6526 ctgaaactgcaattcccggatgctaaaccgtattacgctgacccgtcaggaacattggat 6585 Query: 146 atacacggtaaggcaaagcaagcagactccgccgtttacatcgaatgtaatgtctgtgga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6586 atacacggtaaggcaaagcaagcagactccgccgtttacatcgaatgtaatgtctgtgga 6645 Query: 206 cgggaagttagtgggaacaggttcgctgctcatctcgttagatgcttatcacgtggtaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6646 cgggaagttagtgggaacaggttcgctgctcatctcgttagatgcttatcacgtggtaga 6705 Query: 266 aggtgagatttcattacccagccttagtgcagccttaaatcttcccccaaacccataatg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6706 aggtgagatttcattacccagccttagtgcagccttaaatcttcccccaaacccataatg 6765 Query: 326 tgtgtcatttcaaatcaagttgtccagcatcgtaccctgtacccttaaacctgtgataac 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6766 tgtgtcatttcaaatcaagttgtccagcatcgtaccctgtacccttaaacctgtgataac 6825 Query: 386 gatctttaacccatcattataacggtgtaaagagttgtcaggtgttactctacagaagag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6826 gatctttaacccatcattataacggtgtaaagagttgtcaggtgttactctacagaagag 6885 Query: 446 cggaaagttagagacactagaactagcaagtacccttcagagaattaaactgagttactt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6886 cggaaagttagagacactagaactagcaagtacccttcagagaattaaactgagttactt 6945 Query: 506 atgtcgactttgctagagactttagatcaacaatgggtcaattccagattatacgttgat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6946 atgtcgactttgctagagactttagatcaacaatgggtcaattccagattatacgttgat 7005 Query: 566 aaagacgagcgcaggacccagcttgggaaatgtgttgaagaagtgcacgactttaagatc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7006 aaagacgagcgcaggacccagcttgggaaatgtgttgaagaagtgcacgactttaagatc 7065 Query: 626 cagttgaagaaattgaaagcgcatttgctgaagcatggatcaagtccacagaaacgtctt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7066 cagttgaagaaattgaaagcgcatttgctgaagcatggatcaagtccacagaaacgtctt 7125 Query: 686 gttattagggagaaactagcgaaatctcataagaactgggatttctttcatgaagaaatc 745 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 7126 gttattagggagaaactagcgaaatctcataagaactggga-ttcttccatgaagaaatc 7184 Query: 746 ctttaaactcttctatcagcacttaccgggaagtnttcaaaggcggtgcgtcaaagccct 805 | ||||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||| Sbjct: 7185 c-ttaaactcttctatcagcacttacc-ggaagttttcaaaggc-gtgcgtc-aagccct 7240 Query: 806 tgaaatgagtttc 818 || |||||||||| Sbjct: 7241 tg-aatgagtttc 7252 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6101 Number of Sequences: 1807 Number of extensions: 6101 Number of successful extensions: 30 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)