BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZE06RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1360 1302 0.0 >3x_Contig1360 Length = 8285 Score = 1302 bits (657), Expect = 0.0 Identities = 708/721 (98%), Gaps = 3/721 (0%) Strand = Plus / Minus Query: 48 tatctctttcgataaaaacttcattgcccaaaatgagaggagatttagggagaatggacc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7778 tatctctttcgataaaaacttcattgcccaaaatgagaggagatttagggagaatggacc 7719 Query: 108 tcaaagagttgggagaggcaacactgtagtttcttgttatactaattctgccacttgtgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7718 tcaaagagttgggagaggcaacactgtagtttcttgttatactaattctgccacttgtgg 7659 Query: 168 gtcttctaatttgggcgttgttttgacattgggtatcaatttcagacttattttcttcat 227 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 7658 gtcttctaatttgggcgttgttttgacattgggtatcaatttcagacgtactttcttcat 7599 Query: 228 atgcagttattaacgatgcaatatcttcattttcgttttcatactcatcttggatagcat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7598 atgcagttattaacgatgcaatatcttcattttcgttttcatactcatcttggatagcat 7539 Query: 288 tatcatttgcatcactttccattgaagttgcactcgtctccgttgcttctctattttgtg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7538 tatcatttgcatcactttccattgaagttgcactcgtctccgttgcttctctattttgtg 7479 Query: 348 gtgaacaggatctgtcatctgtcgaatcagatttctcgaaattgaacctacgaaggtcat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7478 gtgaacaggatctgtcatctgtcgaatcagatttctcgaaattgaacctacgaaggtcat 7419 Query: 408 taacattcagctttcttttcaaagttggggcagattccatgaaaatattactactccctt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7418 taacattcagctttcttttcaaagttggggcagattccatgaaaatattactactccctt 7359 Query: 468 tatgttgactcaagatattcccagaagatgaaatatctgaaaatgcagagtcataagtga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7358 tatgttgactcaagatattcccagaagatgaaatatctgaaaatgcagagtcataagtga 7299 Query: 528 caatagaagtaatagagtctctttcaccgttatattctcctatgttgttcaggttatttg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7298 caatagaagtaatagagtctctttcaccgttatattctcctatgttgttcaggttatttg 7239 Query: 588 caagtatggccttctttgtaggagagttccttgtcggatcatggaaaaccaatctttttg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7238 caagtatggccttctttgtaggagagttccttgtcggatcatggaaaaccaatctttttg 7179 Query: 648 gactgctgttgtcattggtattaggtagtcccatttaagcattcgggatgctgtatcttg 707 ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| | Sbjct: 7178 gactgctgttgtcattggtattaggtagtcccattaaggcattcgtgatgctgtatctag 7119 Query: 708 aattattttaagaatacagcatttggtgcagagattttttat-tttttcctcttaagggc 766 ||||||| ||||| ||||||| ||||||||||| ||| |||| |||||||||| |||||| Sbjct: 7118 aattattgtaagagtacagca-ttggtgcagag-tttcttatatttttcctctcaagggc 7061 Query: 767 c 767 | Sbjct: 7060 c 7060 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8329 Number of Sequences: 1807 Number of extensions: 8329 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)