BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZF01RM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1032 486 e-137 >3x_Contig1032 Length = 3920 Score = 486 bits (245), Expect = e-137 Identities = 245/245 (100%) Strand = Plus / Minus Query: 49 ctttatataacaaaatcaatcccggtatgcttcgtaaaggagaacctaacaacaaggtca 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ctttatataacaaaatcaatcccggtatgcttcgtaaaggagaacctaacaacaaggtca 193 Query: 109 atttctaatcaactacacaccactattagtatatatttataagatttacaacaagtaagt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 atttctaatcaactacacaccactattagtatatatttataagatttacaacaagtaagt 133 Query: 169 aaaccctgtgtgtaactaagacacagtataacacacagtaataataaagagataatagca 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 aaaccctgtgtgtaactaagacacagtataacacacagtaataataaagagataatagca 73 Query: 229 tgagcagattaaagtacagtgccgttccagggtatttcaccagttttggtgatgaaaacg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 tgagcagattaaagtacagtgccgttccagggtatttcaccagttttggtgatgaaaacg 13 Query: 289 ttctg 293 ||||| Sbjct: 12 ttctg 8 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6838 Number of Sequences: 1807 Number of extensions: 6838 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)