BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZF10RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1678 1209 0.0 >3x_Contig1678 Length = 12472 Score = 1209 bits (610), Expect = 0.0 Identities = 652/662 (98%), Gaps = 3/662 (0%) Strand = Plus / Plus Query: 44 cttctagggaaggtttaggttaccgtgaactaaccccaagtgtcattacaaagcattttg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8944 cttctagggaaggtttaggttaccgtgaactaaccccaagtgtcattacaaagcattttg 9003 Query: 104 aagatgtgggtttagattcagaaattgccaaccatacacctttgggttctctatccggtg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9004 aagatgtgggtttagattcagaaattgccaaccatacacctttgggttctctatccggtg 9063 Query: 164 gtcaattggttaaagtcgttattgctggtgcaatgtggaataatcctcatttgttggttt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9064 gtcaattggttaaagtcgttattgctggtgcaatgtggaataatcctcatttgttggttt 9123 Query: 224 tagatgaacctacaaattatttggatagagactccctaggtgctctagctatggctattc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9124 tagatgaacctacaaattatttggatagagactccctaggtgctctagctatggctattc 9183 Query: 284 gtgagtggactggtggtgttgttatgatttcgcataacaacgaattcgttggtgcactat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9184 gtgagtggactggtggtgttgttatgatttcgcataacaacgaattcgttggtgcactat 9243 Query: 344 gtccagaacaatggattgttgaaaatggtactatggtccaaaagggtattgctgaaattg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244 gtccagaacaatggattgttgaaaatggtactatggtccaaaagggtattgctgaaattg 9303 Query: 404 atcaaagtagattcgaggatggtggtaacacaaacgctgtgggcttaaacgtgaccaaaa 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9304 atcaaagtagattcgaggatggtggtaacacaaacgctgtgggcttaaacgtgaccaaaa 9363 Query: 464 caattactgatgacgactctccagctaatatcaaggtttgacaaagaaagaagagactca 523 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9364 caattactgatgacgactctccagctaatatcaaggttagacaaagaaagaagagactca 9423 Query: 524 caagaaatgagaagaaagctcaagccgaaccgtcgtagactacgttacatcgaatggcta 583 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9424 caagaaatgagaagaaagctcaagccgaa-cgtcgtagactacgttacatcgaatggcta 9482 Query: 584 ttatcaccaaagggtacaccaaaacccgttgatacagatgattaaggagatgatgatgat 643 | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9483 tcatcaccaaagggtacaccaaaacccgttgatacagatgatgaaggagatgatgatgat 9542 Query: 644 gagt-atttttatcactatctctgcttttcttggttctaatttaattgcggttaacaact 702 |||| ||| | ||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 9543 gagtaattctaatcactatctctgcttttc-tgtttctcatttaattgcggttaacaact 9601 Query: 703 tt 704 || Sbjct: 9602 tt 9603 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9715 Number of Sequences: 1807 Number of extensions: 9715 Number of successful extensions: 95 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)