BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZG04RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1243 1043 0.0 >3x_Contig1243 Length = 5571 Score = 1043 bits (526), Expect = 0.0 Identities = 542/546 (99%), Gaps = 1/546 (0%) Strand = Plus / Plus Query: 121 attgctagttccagttcaggtcccgcgtcctgcgtaacgaaatttggtctcgaggttttt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 attgctagttccagttcaggtcccgcgtcctgcgtaacgaaatttggtctcgaggttttt 64 Query: 181 ccggttgatcccctcccccgcttttttttttcacgaaacttctctcaattatcgtcgtca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 ccggttgatcccctcccccgcttttttttttcacgaaacttctctcaattatcgtcgtca 124 Query: 241 tagagaacgtggttttctctccagtaaaggaataaacggggaagctctaaacagagggta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tagagaacgtggttttctctccagtaaaggaataaacggggaagctctaaacagagggta 184 Query: 301 cattcattcttgtctaacttaagatgcgcaggtctgttgatgggagttgggaatggtact 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cattcattcttgtctaacttaagatgcgcaggtctgttgatgggagttgggaatggtact 244 Query: 361 cagtaagtagttttgcttagggtaggtacatactgtttataaaaaattttaggttgggtt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cagtaagtagttttgcttagggtaggtacatactgtttataaaaaattttaggttgggtt 304 Query: 421 aagttcagtccgatagtaatgagtattgttccagtagaatacaatctcctcctctctcag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 aagttcagtccgatagtaatgagtattgttccagtagaatacaatctcctcctctctcag 364 Query: 481 ggtccgaaatgtatttgtacataaaaccctcgcttgacacgaccctaatcggtaccattg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ggtccgaaatgtatttgtacataaaaccctcgcttgacacgaccctaatcggtaccattg 424 Query: 541 tcaatgtatctgaattttggtagtcgccattgtttgatgcatttttctcgaataaatcgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 tcaatgtatctgaattttggtagtcgccattgtttgatgcatttttctcgaataaatcgg 484 Query: 601 gatactctttgatgctcaactcattcggatcattgatggcagctatggccctttattggt 660 ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| Sbjct: 485 gatactctttgatgctcaactcaatcggatcatcgatggcagctatgg-cctttattggt 543 Query: 661 ggattc 666 ||||| Sbjct: 544 tgattc 549 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 19,910 Number of Sequences: 1807 Number of extensions: 19910 Number of successful extensions: 207 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)