BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZG05FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1723 1400 0.0 >3x_Contig1723 Length = 15177 Score = 1400 bits (706), Expect = 0.0 Identities = 746/756 (98%), Gaps = 4/756 (0%) Strand = Plus / Minus Query: 87 gtgaatacaactgagatgttagaacgcaacccataccaacggggcccgcaccaacaatgg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4125 gtgaatacaactgagatgttagaacgcaacccataccaacggggcccgcaccaacaatgg 4066 Query: 147 cgactgtgtcacccggcttgacgttacccatttgcacaccaatctcatgggcagtaggta 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4065 cgactgtgtcacccggcttgacgttacccatttgcacaccaatctcatgggcagtaggta 4006 Query: 207 gagcatccgaaagcattaccgctgcttcatcggacaaattctctggcacgctgtacaaag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4005 gagcatccgaaagcattaccgctgcttcatcggacaaattctctggcacgctgtacaaag 3946 Query: 267 aagtatcagcgaatggagtgcggacatattcagcttgagtaccatcaatcatataaccta 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945 aagtatcagcgaatggagtgcggacatattcagcttgagtaccatcaatcatataaccta 3886 Query: 327 aaatccatccgcctccattcgtacaatgcgaatacaaagattttgcacaattttcacagg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3885 aaatccatccgcctccattcgtacaatgcgaatacaaagattttgcacaattttcacagg 3826 Query: 387 tcccacatctgctaatacaggacactataaccctatctccttttttgaaattatgaactg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3825 tcccacatctgctaatacaggacactataaccctatctccttttttgaaattatgaactg 3766 Query: 447 catcaccgacctcgtcgataattccaattccctcatgacctaaaatgcgtccattaaaac 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3765 catcaccgacctcgtcgataattccaattccctcatgacctaaaatgcgtccattaaaac 3706 Query: 507 taccttccttcgtttgagcagtttgttcaatttcggggttcttacctttccaaatcccca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3705 taccttccttcgtttgagcagtttgttcaatttcggggttcttacctttccaaatcccca 3646 Query: 567 aatcggtaccgcagattgaagtgtgcgtcattttgataatggcatccgttgaagaaagaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3645 aatcggtaccgcagattgaagtgtgcgtcattttgataatggcatccgttgaagaaagaa 3586 Query: 627 tctggggttgttctctatcctcaaatttgatgtcatttgcaccataatanaccatagcct 686 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3585 tctggggttgttctctatcctcaaatttgatgtcatttgcaccataataaaccatagcct 3526 Query: 687 tcatgatattggtctggttagattttcttctaatacttggacttaatagccgtctacttg 746 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3525 tcatgatattggtctggttagattttcttctaatacttgaacttaatagccgtctacttg 3466 Query: 747 ggaatattcctctgctgacagctttacgaaacatttcagtgtgagaaattaaatttctta 806 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | Sbjct: 3465 ggaatattcctctgctgacagctttacgaaacatttcagtgtgag-aattcaatttctaa 3407 Query: 807 actaacgaacacattacatttccctttttaacaaaa 842 ||| ||||||||| |||||| || ||||||||||| Sbjct: 3406 act-acgaacacaatacatt--cccttttaacaaaa 3374 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5805 Number of Sequences: 1807 Number of extensions: 5805 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)