BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC27ZG05FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1723                                                        1400   0.0  

>3x_Contig1723 
          Length = 15177

 Score = 1400 bits (706), Expect = 0.0
 Identities = 746/756 (98%), Gaps = 4/756 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   gtgaatacaactgagatgttagaacgcaacccataccaacggggcccgcaccaacaatgg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4125 gtgaatacaactgagatgttagaacgcaacccataccaacggggcccgcaccaacaatgg 4066

                                                                        
Query: 147  cgactgtgtcacccggcttgacgttacccatttgcacaccaatctcatgggcagtaggta 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4065 cgactgtgtcacccggcttgacgttacccatttgcacaccaatctcatgggcagtaggta 4006

                                                                        
Query: 207  gagcatccgaaagcattaccgctgcttcatcggacaaattctctggcacgctgtacaaag 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4005 gagcatccgaaagcattaccgctgcttcatcggacaaattctctggcacgctgtacaaag 3946

                                                                        
Query: 267  aagtatcagcgaatggagtgcggacatattcagcttgagtaccatcaatcatataaccta 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3945 aagtatcagcgaatggagtgcggacatattcagcttgagtaccatcaatcatataaccta 3886

                                                                        
Query: 327  aaatccatccgcctccattcgtacaatgcgaatacaaagattttgcacaattttcacagg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3885 aaatccatccgcctccattcgtacaatgcgaatacaaagattttgcacaattttcacagg 3826

                                                                        
Query: 387  tcccacatctgctaatacaggacactataaccctatctccttttttgaaattatgaactg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3825 tcccacatctgctaatacaggacactataaccctatctccttttttgaaattatgaactg 3766

                                                                        
Query: 447  catcaccgacctcgtcgataattccaattccctcatgacctaaaatgcgtccattaaaac 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3765 catcaccgacctcgtcgataattccaattccctcatgacctaaaatgcgtccattaaaac 3706

                                                                        
Query: 507  taccttccttcgtttgagcagtttgttcaatttcggggttcttacctttccaaatcccca 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3705 taccttccttcgtttgagcagtttgttcaatttcggggttcttacctttccaaatcccca 3646

                                                                        
Query: 567  aatcggtaccgcagattgaagtgtgcgtcattttgataatggcatccgttgaagaaagaa 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3645 aatcggtaccgcagattgaagtgtgcgtcattttgataatggcatccgttgaagaaagaa 3586

                                                                        
Query: 627  tctggggttgttctctatcctcaaatttgatgtcatttgcaccataatanaccatagcct 686
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3585 tctggggttgttctctatcctcaaatttgatgtcatttgcaccataataaaccatagcct 3526

                                                                        
Query: 687  tcatgatattggtctggttagattttcttctaatacttggacttaatagccgtctacttg 746
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3525 tcatgatattggtctggttagattttcttctaatacttgaacttaatagccgtctacttg 3466

                                                                        
Query: 747  ggaatattcctctgctgacagctttacgaaacatttcagtgtgagaaattaaatttctta 806
            ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 3465 ggaatattcctctgctgacagctttacgaaacatttcagtgtgag-aattcaatttctaa 3407

                                                
Query: 807  actaacgaacacattacatttccctttttaacaaaa 842
            ||| ||||||||| ||||||  || |||||||||||
Sbjct: 3406 act-acgaacacaatacatt--cccttttaacaaaa 3374


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5805
Number of Sequences: 1807
Number of extensions: 5805
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)