BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZG12RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1487 1261 0.0 3x_Contig1718 131 3e-30 3x_Contig1623 131 3e-30 3x_Contig1762 123 7e-28 3x_Contig17 123 7e-28 3x_Contig1390 115 2e-25 >3x_Contig1487 Length = 9002 Score = 1261 bits (636), Expect = 0.0 Identities = 680/692 (98%), Gaps = 2/692 (0%) Strand = Plus / Minus Query: 50 gcttcgataaacgaagtttaacttctgcaaagcatgcgagaggccctgggttcaattccc 109 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5400 gcttcgataaacgaagtttaactactgcaaagcatgcgagaggccctgggttcaattccc 5341 Query: 110 agctcgccccgaaattatttttgactaacaagacttttagtcacgtgacctcgtttactt 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5340 agctcgccccgaaattatttttgactaacaagacttttagtcacgtgacctcgtttactt 5281 Query: 170 tcctgttttatttcaacaaaagtaaaaattcttttcacctaccaaataaggtaccataaa 229 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5280 tcctgaagtatttcaacaaaagtaaaaattcttttcacctaccaaataaggcaccataaa 5221 Query: 230 tctacaatgacaatgctcttattgcagccaattgattgctatagttctgcttttctctat 289 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5220 gctacaatgacaatgctcttattgcagccaattgattgctatagttctgcttttctctat 5161 Query: 290 agtctacttccactgggcgctcaaagttacaacagttatcattctccgttgaattatctg 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5160 agtctacttccactgggcgctcaaagttacaacagttatcattctccgttgaattatctg 5101 Query: 350 tgcatttagccgtttcagttttattcgaagaatacactaatagaatatactgtcaaaaat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5100 tgcatttagccgtttcagttttattcgaagaatacactaatagaatatactgtcaaaaat 5041 Query: 410 acacgatgtctatgatatcggctagagcgagattgagtcttgcccaatcccttagaatta 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5040 acacgatgtctatgatatcggctagagcgagattgagtcttgcccaatcccttagaatta 4981 Query: 470 atgggggtcttagaagtttttcaaacgctagagtacaactgaaccagaaacaaagtaaca 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4980 atgggggtcttagaagtttttcaaacgctagagtacaactgaaccagaaacaaagtaaca 4921 Query: 530 gtgacggtttcagtggtgattcgacaacacacttcgggtcgaggactgtgttgaaagagg 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4920 gtgacggtttcagtggtgattcgacaacacacttcgggtcgaggactgtgttgaaagagg 4861 Query: 590 -aaaagagaaactcgtcggttacgtgttttctagtgttgcttccaagtacgatgtgatga 648 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4860 aaaaagagaaactcgtcggtaacgtgttttctagtgttgcttccaagtacgatgtgatga 4801 Query: 649 acgacgtgatgtctctagggatccatagactatgggaggaccatttcattaataagttag 708 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4800 acgacgtgatgtctctagggatccatagactatggaaggaccatttcattaataagttag 4741 Query: 709 acgcagggaaaaagacctaactttacggaacc 740 ||||| || ||||||||||||| ||||||||| Sbjct: 4740 acgca-ggtaaaagacctaactctacggaacc 4710 >3x_Contig1718 Length = 19496 Score = 131 bits (66), Expect = 3e-30 Identities = 69/70 (98%) Strand = Plus / Plus Query: 50 gcttcgataaacgaagtttaacttctgcaaagcatgcgagaggccctgggttcaattccc 109 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4958 gcttcgataaacgaagtttaactactgcaaagcatgcgagaggccctgggttcaattccc 5017 Query: 110 agctcgcccc 119 |||||||||| Sbjct: 5018 agctcgcccc 5027 >3x_Contig1623 Length = 14379 Score = 131 bits (66), Expect = 3e-30 Identities = 69/70 (98%) Strand = Plus / Minus Query: 50 gcttcgataaacgaagtttaacttctgcaaagcatgcgagaggccctgggttcaattccc 109 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 7076 gcttcgataaacgaagtttaactactgcaaagcatgcgagaggccctgggttcaattccc 7017 Query: 110 agctcgcccc 119 |||||||||| Sbjct: 7016 agctcgcccc 7007 >3x_Contig1762 Length = 22098 Score = 123 bits (62), Expect = 7e-28 Identities = 68/70 (97%) Strand = Plus / Plus Query: 50 gcttcgataaacgaagtttaacttctgcaaagcatgcgagaggccctgggttcaattccc 109 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6162 gcttcgataaacggagtttaactactgcaaagcatgcgagaggccctgggttcaattccc 6221 Query: 110 agctcgcccc 119 |||||||||| Sbjct: 6222 agctcgcccc 6231 >3x_Contig17 Length = 819 Score = 123 bits (62), Expect = 7e-28 Identities = 68/70 (97%) Strand = Plus / Minus Query: 50 gcttcgataaacgaagtttaacttctgcaaagcatgcgagaggccctgggttcaattccc 109 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 206 gcttcgataaacgaggtttaactactgcaaagcatgcgagaggccctgggttcaattccc 147 Query: 110 agctcgcccc 119 |||||||||| Sbjct: 146 agctcgcccc 137 >3x_Contig1390 Length = 7609 Score = 115 bits (58), Expect = 2e-25 Identities = 68/70 (97%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 50 gcttcgataaacgaagtttaacttctgcaaagcatgcgagaggccctgggttcaattccc 109 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 5495 gcttcgataaacgaagtttaactactgcaa-gcatgcgagaggccctgggttcaattccc 5553 Query: 110 agctcgcccc 119 |||||||||| Sbjct: 5554 agctcgcccc 5563 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6077 Number of Sequences: 1807 Number of extensions: 6077 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 6 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)