BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC27ZH07FM1.SCF screened BAC_end
         (929 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1763                                                        1074   0.0  

>3x_Contig1763 
          Length = 22654

 Score = 1074 bits (542), Expect = 0.0
 Identities = 586/597 (98%), Gaps = 4/597 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    ccagattgtatacaaggccaagaggatccctatacaaatcgccaatcaaatttaattatc 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10975 ccagattgtatacaaggccaagaggatccctatacaaatcgccaatcaaatttaattatc 10916

                                                                         
Query: 146   caaactaaattgaaatcaaaaactaaaagaatgcaggaatacgagacacttcctttttgt 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10915 caaactaaattgaaatcaaaaactaaaagaatgcaggaatacgagacacttcctttttgt 10856

                                                                         
Query: 206   cgtctcttttcggtattatgctatttccttttatttctccgttttgattggttttttttt 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10855 cgtctcttttcggtattatgctatttccttttatttctccgttttgattggttttttttt 10796

                                                                         
Query: 266   ttctcttttgcacaattgcaatgcaactcgcgcactctatctaaacctcaagagtttgtc 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10795 ttctcttttgcacaattgcaatgcaactcgcgcactctatctaaacctcaagagtttgtc 10736

                                                                         
Query: 326   tggcctttctaacccaattcaagctaaaacttgtttatacgaattacttatatatgtata 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10735 tggcctttctaacccaattcaagctaaaacttgtttatacgaattacttatatatgtata 10676

                                                                         
Query: 386   gacatatatatatttatatatgttctaagtatattgatagacttattcaattattttggg 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10675 gacatatatatatttatatatgttctaagtatattgatagacttattcaattattttggg 10616

                                                                         
Query: 446   cctaatcttttctcattttctgattctctcatttccactcagaaaaagaacaattgaaaa 505
             |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 10615 cctaatcttttctcattttctgattctctcattttcactcagaaaaagaacaaatgaaaa 10556

                                                                         
Query: 506   taccgacagcacgcagcaccgggttcctggcagtgtggtacaagaacctgcagttttcga 565
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 10555 taccgacagcacgcagcacc-ggttcctggcagtgtggtacaagaacctgcagttttcga 10497

                                                                         
Query: 566   attgtttttctgtgatccttttggttacccgggggtttgtgtttcgtacatgaagatacg 625
             |||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||||||
Sbjct: 10496 attgtttttctgtgatcc-tttggttacccgggg--ttgtgtttcgtacatgatgatacg 10440

                                                                      
Query: 626   gggatcccggatctggaaaaaaaaaggggtttttgcccagttctagtcttgtgactg 682
             | ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||
Sbjct: 10439 gtgatcccggatctggaaataaaaaggggttcttgcccagttctagtcatgtgactg 10383


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,402
Number of Sequences: 1807
Number of extensions: 16402
Number of successful extensions: 244
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)