BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZH09FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1118 1441 0.0 >3x_Contig1118 Length = 5540 Score = 1441 bits (727), Expect = 0.0 Identities = 760/770 (98%), Gaps = 1/770 (0%) Strand = Plus / Plus Query: 85 ttctcaaatatcctctaatgtagtagctaagatctcacaatcgttccccgttaatatgtt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3114 ttctcaaatatcctctaatgtagtagctaagatctcacaatcgttccccgttaatatgtt 3173 Query: 145 caaaatatcccctctgccgccttgaatgtgtgtgtggtaagtcgaggaaaacccaccggc 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3174 caaaatatcccctctgccgccttgaatgtgtgtgtggtaagtcgaggaaaacccaccggc 3233 Query: 205 gtgcaattcgaatgtttaaatctatgccaataacaatgataacttgtggacctacagcag 264 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3234 gtgcaattcgaaggtttaaatctatgccaataacaatgataacttgtggacctacagcag 3293 Query: 265 ttgatttatttgacgataaaaacagacaaatgaacttttagctctgtttcggtaccttgt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3294 ttgatttatttgacgataaaaacagacaaatgaacttttagctctgtttcggtaccttgt 3353 Query: 325 ttcaagtttacttcttgtgcttagtatttcaacatttctgctttttttactttttcttgg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3354 ttcaagtttacttcttgtgcttagtatttcaacatttctgctttttttactttttcttgg 3413 Query: 385 ggacacaggtaggtcctaaaaaaagaagtaaataaataacattcttgatgcagatgttgc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3414 ggacacaggtaggtcctaaaaaaagaagtaaataaataacattcttgatgcagatgttgc 3473 Query: 445 tggggtcacttaaggcttataactcggccatgaaaaatacagtttgtggtactttaagta 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3474 tggggtcacttaaggcttataactcggccatgaaaaatacagtttgtggtactttaagta 3533 Query: 505 tatcttattgttatcattatatataattacaagcaaattagttgctgtggcatactacaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3534 tatcttattgttatcattatatataattacaagcaaattagttgctgtggcatactacaa 3593 Query: 565 gacattgtaaaaactaagtaaggccaaggttgaagttttccgatgagttatcttggtgtc 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3594 gacattgtaaaaactaagtaaggccaaggttgaagttttccgatgagttatcttggtgtc 3653 Query: 625 tgacttaaacaagcttctggcagactaaaaaatggcctttatattctattgcgcatggtt 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3654 tgacttaaacaagcttctggcagactaaaaaatggcctttatattctattgcgcatggtt 3713 Query: 685 attttcatgcttttttctgnaaggtgagttgtctggatctacagaaatttgctgttggac 744 |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 3714 atttccatgcttttttctgaaaggtgagttgtctggatctacagaaatttgctgttgtac 3773 Query: 745 tgggagtactttctgtttgttaaagaaagggatactgtaatacatgtttcctctgacgat 804 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3774 tgggagtactttctggttgttaaagaatgggatactgtaatacatgtttcctctgacgat 3833 Query: 805 caattcgaattcatatttgatcaa-tcttttccacggtcaatttcattct 853 |||||||||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 3834 caattcgaattcatatttgatcaattctttccaacggtcaatatcattct 3883 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7317 Number of Sequences: 1807 Number of extensions: 7317 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)