BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC27ZH11RM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1017 1078 0.0 >3x_Contig1017 Length = 3431 Score = 1078 bits (544), Expect = 0.0 Identities = 622/643 (96%), Gaps = 5/643 (0%) Strand = Plus / Plus Query: 51 gctgttagtggttttgt-aaata-tcgacatctacaatagccgaatcgttgtggcactcc 108 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 385 gctgttagtggttttgtcaaataatcgacatctacaatagccgaatcgttgtggcactcc 444 Query: 109 acggtaatatggatttcgaaatctttaccgtgatactgggttacatcattatacttccat 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 acggtaatatggatttcgaaatctttaccgtgatactgggttacatcattatacttccat 504 Query: 169 acaatgtgttcaaacgattcttcctttgccttgtctttaaacttcaaatcaggcagcttg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 acaatgtgttcaaacgattcttcctttgccttgtctttaaacttcaaatcaggcagcttg 564 Query: 229 attctctctttgatgtcctttagcaaatgtttttcgatatgctgatgcaaatgcctcaca 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 attctctctttgatgtcctttagcaaatgtttttcgatatgctgatgcaaatgcctcaca 624 Query: 289 aacttctttgaatgtgaattggctgaatccttaatcttttcaggatcctcatgcgattcg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 aacttctttgaatgtgaattggctgaatccttaatcttttcaggatcctcatgcgattcg 684 Query: 349 tgtagtacaaatggaggatagtacttcaaatgacaatgaacgtgatcaaattcctcatct 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 tgtagtacaaatggaggatagtacttcaaatgacaatgaacgtgatcaaattcctcatct 744 Query: 409 tcagtttcgttcttaatgaatgtttcgaaatcgttcaaatcttcaaacaccttgacgact 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tcagtttcgttcttaatgaatgtttcgaaatcgttcaaatcttcaaacaccttgacgact 804 Query: 469 tctccggacttggtggtgacattagcaaactttggtcctttatccttcttggtcatttct 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 tctccggacttggtggtgacattagcaaactttggtcctttatccttcttggtcatttct 864 Query: 529 gtgaatattcttctctgatgtagagtgtgtctgtgtgtttaaagttaatatatgtattaa 588 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 865 gtgaatattcttctctgatgtagagtgtgtctgtgtgttaaaagttaatatatgtattaa 924 Query: 589 ctattgcaaaatgatgcttgtgttacgaatggttgcccttaagaaaagggaaaa--ccat 646 |||||||||| ||||||||||| ||| ||||| || || ||||||| |||||| ||| Sbjct: 925 ctattgcaaattgatgcttgtg-taccgatggtagcactcaagaaaaaggaaaaacacat 983 Query: 647 taactttgggttttcggcgaaaaggattatcaaacttggagtt 689 ||||| |||| | |||| || ||||||| ||||||||||||| Sbjct: 984 aaacttagggtatacggcaaagaggattagcaaacttggagtt 1026 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7459 Number of Sequences: 1807 Number of extensions: 7459 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)