BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZA05RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1630 1015 0.0 >3x_Contig1630 Length = 14771 Score = 1015 bits (512), Expect = 0.0 Identities = 587/608 (96%), Gaps = 3/608 (0%) Strand = Plus / Minus Query: 21 gcttcgttactctt-acaaacactattattttagcgtttctcgaagcactgctcttgatg 79 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10379 gcttcgttactcttcacaaacactaatattttagcgtttctcgaagcactgctcttgatg 10320 Query: 80 tcgtgtattattcttagtaagagtagtggcttgaacagactcttagcagtaggaatattg 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10319 tcgtgtattattcttagtaagagtagtggcttgaacagactcttagcagtaggaatattg 10260 Query: 140 acattgagttcttgcaatttcttaggtattgaatataatttaacagaatctgtgaggaag 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10259 acattgagttcttgcaatttcttaggtattgaatataatttaacagaatctgtgaggaag 10200 Query: 200 atcttggggttgtggagatacaaattgtacaacttttctgcattcgtagtcaaagtagca 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10199 atcttggggttgtggagatacaaattgtacaacttttctgcattcgtagtcaaagtagca 10140 Query: 260 gaaaagaccattttgattacgtttcctggacgtttatcctgcttatcgtttgtcaaatgg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10139 gaaaagaccattttgattacgtttcctggacgtttatcctgcttatcgtttgtcaaatgg 10080 Query: 320 tggaaaagcacttggttccaattttggaatgactgatttaatagtctgtctgcttcattc 379 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 10079 tggaaaagcacttggttccaattttggaatgactgatttaatagtcggtctgcttca-tc 10021 Query: 380 aatgactaagaacttcaaagtttttaggtcaaatgattccatctgcaagtgatcgaccag 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10020 aaggactaagaacttcaaagtttttaggtcaaatgattccatctgcaagtgatcgaccag 9961 Query: 440 tctgtccggagtgatgattagaatgtctggagagttatacataaatttgttgtgttcttt 499 |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9960 tctgcccggagtgatgattagaatgtctggagagttatacaaaaatttgttgtgttcttc 9901 Query: 500 ttttaaggagttctttagcttcgacatttgatacattgagactggccccttgacttattt 559 ||| |||||||||| || ||||||| |||||||||||||||||| ||||||||||| || Sbjct: 9900 tttcaaggagttctcgagtttcgaca-ttgatacattgagactggtcccttgacttagtt 9842 Query: 560 tacagagacaatcgtatacttgatgaattaaaattttagttggaacccaaatttatgccc 619 || ||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 9841 tagagagacaatcgtagacttgatgaattaaaattttagtaggaaccaaaattattgccc 9782 Query: 620 taacttta 627 |||||||| Sbjct: 9781 taacttta 9774 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,797 Number of Sequences: 1807 Number of extensions: 10797 Number of successful extensions: 132 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)