BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZA10RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1529 870 0.0 >3x_Contig1529 Length = 11812 Score = 870 bits (439), Expect = 0.0 Identities = 439/439 (100%) Strand = Plus / Minus Query: 49 gtagacagacctccatcagttggcatcaagaacaacgtctgtgttaatctattctcattg 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 gtagacagacctccatcagttggcatcaagaacaacgtctgtgttaatctattctcattg 380 Query: 109 ataggtttccttggattatcaaaacatttagtgaataagcactcttctataaaaggttga 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ataggtttccttggattatcaaaacatttagtgaataagcactcttctataaaaggttga 320 Query: 169 atacgatccattttggaagcccgtatatccgttcgcgaagtaacagctttaaaacgcaac 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 atacgatccattttggaagcccgtatatccgttcgcgaagtaacagctttaaaacgcaac 260 Query: 229 acttaccgaatactggttgtacccagctttaaaaccggtaagattgttgtcccttcggca 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 acttaccgaatactggttgtacccagctttaaaaccggtaagattgttgtcccttcggca 200 Query: 289 gaatgtttctttcaagtttatctcatctcaatttttcaagttttacccgatgagcttccg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaatgtttctttcaagtttatctcatctcaatttttcaagttttacccgatgagcttccg 140 Query: 349 atatttgatttacttccatgcacaacgttgtgaagatgaagatataaatttcgttgggct 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 atatttgatttacttccatgcacaacgttgtgaagatgaagatataaatttcgttgggct 80 Query: 409 gaacaatttgtgaggacctctatgggtgagaagcatccatgatcagtaaatgtacgcatc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 gaacaatttgtgaggacctctatgggtgagaagcatccatgatcagtaaatgtacgcatc 20 Query: 469 gagtagcgacaacgctatt 487 ||||||||||||||||||| Sbjct: 19 gagtagcgacaacgctatt 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8630 Number of Sequences: 1807 Number of extensions: 8630 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)