BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZB04FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1763 1156 0.0 >3x_Contig1763 Length = 22654 Score = 1156 bits (583), Expect = 0.0 Identities = 634/647 (97%), Gaps = 3/647 (0%) Strand = Plus / Minus Query: 86 ttagatcctaagacggttagctatattttcccagtggcaagacatatcgggttctgtgcc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9243 ttagatcctaagacggttagctatattttcccagtggcaagacatatcgggttctgtgcc 9184 Query: 146 acaggaccggttccagatgccagaaatattgcattgagatgtaaagccgaagctagtgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9183 acaggaccggttccagatgccagaaatattgcattgagatgtaaagccgaagctagtgag 9124 Query: 206 tttcgttataaatatgggtatgatatcccatgctccgtactagctaaaagaatggccaat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9123 tttcgttataaatatgggtatgatatcccatgctccgtactagctaaaagaatggccaat 9064 Query: 266 ttgtcgcaaatatacacacaaagagcttacatgagaccattagggattattttgactttt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9063 ttgtcgcaaatatacacacaaagagcttacatgagaccattagggattattttgactttt 9004 Query: 326 atttcgtacgatgaggaaacaggacctgctattttcaaatgtgaccctgctggttactat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9003 atttcgtacgatgaggaaacaggacctgctattttcaaatgtgaccctgctggttactat 8944 Query: 386 acggggtacaaggctactgccactggcccaaaacagcaggagttgaactctgctttggag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8943 acggggtacaaggctactgccactggcccaaaacagcaggagttgaactctgctttggag 8884 Query: 446 aagcatttcaagaagttaaaggacgataaaatcgatgaggaaagttgggaaaaaaccgtt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8883 aagcatttcaagaagttaaaggacgataaaatcgatgaggaaagttgggaaaaaaccgtt 8824 Query: 506 gagttcggtatcactacccttattgactcattaggaacagatttcagcaaaaatgatcta 565 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 8823 gagttcggtatcactaccctaattgactcattaggaacagatttcagcaaaaatgatcta 8764 Query: 566 gaagttggtgtagcgattaaggattaattctttacgcttacagctgatgaanattgagg- 624 |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| Sbjct: 8763 gaagttggtgtagcgattaaggataaattctttacgctaacagctgatgaa-attgagga 8705 Query: 625 aagattggtctctattgctgaacaggattaaggtangaaaatttctttccccctcatata 684 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 8704 aagattggtctctattgctgaacaagattaaggta-gaaaatttctttccccctcatata 8646 Query: 685 aatatataattcaaaacattttactttattgtagttcccacatcaaa 731 |||||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 8645 aatatataattcaaaacaatatcacttattgtagttccaacatcaaa 8599 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7620 Number of Sequences: 1807 Number of extensions: 7620 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)