BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZB06FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1337 1292 0.0 >3x_Contig1337 Length = 7771 Score = 1292 bits (652), Expect = 0.0 Identities = 730/752 (97%), Gaps = 3/752 (0%) Strand = Plus / Plus Query: 82 aaacggtaggcgagttgtcattatcattatcatcatcatcatcctgcaaaggatccatat 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2714 aaacggtaggcgagttgtcattatcattatcatcatcatcatcctgcaaaggatccatat 2773 Query: 142 gtaaattaaaatcttatctgggtataacgtgtgtaatataattttttttcttcacaaata 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2774 gtaaattaaaatcttatctgggtataacgtgtgtaatataattttttttcttcacaaata 2833 Query: 202 ggccattcgggcttctgttgatcaatgtattagagcaataccaagatgtcgaagacatct 261 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2834 ggccattcgggcatctgttgatcaatgtattagagcaataccaagatgtcgaagacatct 2893 Query: 262 tggtattgttgttacatatatgacaaaccacgtgactttctgtcacgtgcttcccatccc 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2894 tggtattgttgttacatatatgacaaaccacgtgactttctgtcacgtgcttcccatccc 2953 Query: 322 cacgtgacactaaattttcttctttttttcctctgccgtccaatgaaatcgccgtgcgta 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2954 cacgtgacactaaattttcttctttttttcctctgccgtccaatgaaatcgccgtgcgta 3013 Query: 382 atgctgacgttaccagccacacagaaacacaggttttcaaaggcacgggaaaccgtggga 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3014 atgctgacgttaccagccacacagaaacacaggttttcaaaggcacgggaaaccgtggga 3073 Query: 442 ctactcaccgttatataacggatttcaaattgatttggaatttaaacttttactactatg 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3074 ctactcaccgttatataacggatttcaaattgatttggaatttaaacttttactactatg 3133 Query: 502 ccccagcggcgctatttgccaagccgtaatctttttcatttttttcccaattcattgtaa 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3134 ccccagcggcgctatttgccaagccgtaatctttttcatttttttcccaattcattgtaa 3193 Query: 562 atatatatatattactatacaaagtttatataaagcttgtacgttttattcactttttta 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 atatatatatattactatacaaagtttatataaagcttgtacgttttattcactttttta 3253 Query: 622 t-agcacttcttcgcagttttctgtatttagtttttagaagaacattattggaaacagtg 680 | ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 3254 taagcacttcttcgcagttttctgtatttagtttttagagaaacaatattggaacaagtg 3313 Query: 681 tcagacacattgcttgagctgttggttggtttttgtttgcactcgccatatctattttga 740 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 3314 tcagacacattgcttgagctgttggttggtttttgtttgcactcgcagtatctatttgaa 3373 Query: 741 ttttcatgaacgttttt-aaagaaaa-aaagttgaggggatttttttagaaatgaaaccc 798 || |||| |||||||| |||||||| |||||||||| |||||||| |||| ||||||| Sbjct: 3374 ttctcatagacgtttttcaaagaaaataaagttgaggtgattttttgagaagtgaaacca 3433 Query: 799 agggaacaaacctggaataaatgggaaacaaa 830 |||||||||||||||||||| |||| |||||| Sbjct: 3434 agggaacaaacctggaataagtggggaacaaa 3465 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,963 Number of Sequences: 1807 Number of extensions: 12963 Number of successful extensions: 321 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)